Protein–RNA interactions for Protein: Q60764

Mkrn3, Probable E3 ubiquitin-protein ligase makorin-3, mousemouse

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mkrn3Q60764 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mkrn3Q60764 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mkrn3Q60764 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mkrn3Q60764 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Mkrn3Q60764 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Mkrn3Q60764 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.68■□□□□ 0.58
Mkrn3Q60764 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.68■□□□□ 0.58
Mkrn3Q60764 Haglr-201ENSMUST00000100000 2085 ntBASIC18.68■□□□□ 0.58
Mkrn3Q60764 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Mkrn3Q60764 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mkrn3Q60764 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Mkrn3Q60764 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Mkrn3Q60764 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mkrn3Q60764 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mkrn3Q60764 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.67■□□□□ 0.58
Mkrn3Q60764 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.67■□□□□ 0.58
Mkrn3Q60764 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mkrn3Q60764 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.67■□□□□ 0.58
Mkrn3Q60764 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.67■□□□□ 0.58
Mkrn3Q60764 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mkrn3Q60764 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mkrn3Q60764 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.67■□□□□ 0.58
Mkrn3Q60764 Gm25116-201ENSMUST00000157191 122 ntBASIC18.67■□□□□ 0.58
Mkrn3Q60764 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mkrn3Q60764 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mkrn3Q60764 Gm8969-201ENSMUST00000199694 526 ntBASIC18.67■□□□□ 0.58
Mkrn3Q60764 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mkrn3Q60764 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mkrn3Q60764 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC18.67■□□□□ 0.58
Mkrn3Q60764 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mkrn3Q60764 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mkrn3Q60764 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mkrn3Q60764 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mkrn3Q60764 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mkrn3Q60764 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Mkrn3Q60764 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mkrn3Q60764 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mkrn3Q60764 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mkrn3Q60764 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mkrn3Q60764 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mkrn3Q60764 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mkrn3Q60764 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mkrn3Q60764 AA414768-201ENSMUST00000121924 1257 ntBASIC18.66■□□□□ 0.58
Mkrn3Q60764 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mkrn3Q60764 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Mkrn3Q60764 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mkrn3Q60764 Gm6345-202ENSMUST00000180900 204 ntBASIC18.66■□□□□ 0.58
Mkrn3Q60764 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mkrn3Q60764 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mkrn3Q60764 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Mkrn3Q60764 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mkrn3Q60764 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mkrn3Q60764 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mkrn3Q60764 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Mkrn3Q60764 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mkrn3Q60764 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mkrn3Q60764 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Mkrn3Q60764 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mkrn3Q60764 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Mkrn3Q60764 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mkrn3Q60764 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Mkrn3Q60764 Actl10-202ENSMUST00000226583 1501 ntBASIC18.65■□□□□ 0.58
Mkrn3Q60764 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mkrn3Q60764 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mkrn3Q60764 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mkrn3Q60764 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mkrn3Q60764 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mkrn3Q60764 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.65■□□□□ 0.58
Mkrn3Q60764 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mkrn3Q60764 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mkrn3Q60764 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18.65■□□□□ 0.58
Mkrn3Q60764 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mkrn3Q60764 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mkrn3Q60764 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Mkrn3Q60764 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Mkrn3Q60764 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mkrn3Q60764 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Mkrn3Q60764 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mkrn3Q60764 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mkrn3Q60764 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mkrn3Q60764 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Mkrn3Q60764 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mkrn3Q60764 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Mkrn3Q60764 Gm18958-201ENSMUST00000174258 762 ntBASIC18.64■□□□□ 0.57
Mkrn3Q60764 Gm27000-201ENSMUST00000182943 842 ntBASIC18.64■□□□□ 0.57
Mkrn3Q60764 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Mkrn3Q60764 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Mkrn3Q60764 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mkrn3Q60764 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Mkrn3Q60764 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Mkrn3Q60764 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Mkrn3Q60764 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mkrn3Q60764 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mkrn3Q60764 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mkrn3Q60764 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mkrn3Q60764 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.64■□□□□ 0.57
Mkrn3Q60764 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mkrn3Q60764 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Mkrn3Q60764 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mkrn3Q60764 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms