Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Trim38Q5SZ99 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim38Q5SZ99 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Trim38Q5SZ99 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim38Q5SZ99 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim38Q5SZ99 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim38Q5SZ99 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trim38Q5SZ99 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim38Q5SZ99 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trim38Q5SZ99 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
Trim38Q5SZ99 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim38Q5SZ99 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim38Q5SZ99 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim38Q5SZ99 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim38Q5SZ99 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Trim38Q5SZ99 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim38Q5SZ99 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.33■□□□□ 0.37
Trim38Q5SZ99 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim38Q5SZ99 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim38Q5SZ99 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim38Q5SZ99 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim38Q5SZ99 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trim38Q5SZ99 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim38Q5SZ99 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim38Q5SZ99 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim38Q5SZ99 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim38Q5SZ99 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim38Q5SZ99 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.33■□□□□ 0.36
Trim38Q5SZ99 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trim38Q5SZ99 Gm30025-201ENSMUST00000218555 728 ntBASIC17.33■□□□□ 0.36
Trim38Q5SZ99 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim38Q5SZ99 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trim38Q5SZ99 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim38Q5SZ99 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim38Q5SZ99 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trim38Q5SZ99 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim38Q5SZ99 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim38Q5SZ99 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim38Q5SZ99 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.32■□□□□ 0.36
Trim38Q5SZ99 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim38Q5SZ99 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim38Q5SZ99 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Trim38Q5SZ99 Gm37055-201ENSMUST00000191866 133 ntBASIC17.32■□□□□ 0.36
Trim38Q5SZ99 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.32■□□□□ 0.36
Trim38Q5SZ99 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.32■□□□□ 0.36
Trim38Q5SZ99 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim38Q5SZ99 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim38Q5SZ99 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trim38Q5SZ99 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim38Q5SZ99 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim38Q5SZ99 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim38Q5SZ99 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim38Q5SZ99 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim38Q5SZ99 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trim38Q5SZ99 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim38Q5SZ99 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim38Q5SZ99 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim38Q5SZ99 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trim38Q5SZ99 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Trim38Q5SZ99 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trim38Q5SZ99 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim38Q5SZ99 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim38Q5SZ99 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim38Q5SZ99 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim38Q5SZ99 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim38Q5SZ99 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.31■□□□□ 0.36
Trim38Q5SZ99 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim38Q5SZ99 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.31■□□□□ 0.36
Trim38Q5SZ99 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.31■□□□□ 0.36
Trim38Q5SZ99 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim38Q5SZ99 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim38Q5SZ99 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim38Q5SZ99 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim38Q5SZ99 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim38Q5SZ99 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim38Q5SZ99 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim38Q5SZ99 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim38Q5SZ99 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim38Q5SZ99 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim38Q5SZ99 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Trim38Q5SZ99 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim38Q5SZ99 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim38Q5SZ99 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim38Q5SZ99 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim38Q5SZ99 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim38Q5SZ99 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trim38Q5SZ99 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim38Q5SZ99 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim38Q5SZ99 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim38Q5SZ99 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.3■□□□□ 0.36
Trim38Q5SZ99 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.3■□□□□ 0.36
Trim38Q5SZ99 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim38Q5SZ99 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trim38Q5SZ99 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Trim38Q5SZ99 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim38Q5SZ99 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trim38Q5SZ99 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trim38Q5SZ99 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim38Q5SZ99 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trim38Q5SZ99 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms