Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shroom1Q5SX79 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.79■□□□□ 0.44
Shroom1Q5SX79 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Shroom1Q5SX79 Gm7153-201ENSMUST00000117092 455 ntBASIC17.79■□□□□ 0.44
Shroom1Q5SX79 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Shroom1Q5SX79 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.79■□□□□ 0.44
Shroom1Q5SX79 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.79■□□□□ 0.44
Shroom1Q5SX79 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.79■□□□□ 0.44
Shroom1Q5SX79 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shroom1Q5SX79 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Shroom1Q5SX79 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Shroom1Q5SX79 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Shroom1Q5SX79 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shroom1Q5SX79 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Shroom1Q5SX79 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shroom1Q5SX79 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shroom1Q5SX79 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Shroom1Q5SX79 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shroom1Q5SX79 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shroom1Q5SX79 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shroom1Q5SX79 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.79■□□□□ 0.44
Shroom1Q5SX79 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Shroom1Q5SX79 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Shroom1Q5SX79 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Shroom1Q5SX79 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shroom1Q5SX79 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shroom1Q5SX79 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.78■□□□□ 0.44
Shroom1Q5SX79 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shroom1Q5SX79 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shroom1Q5SX79 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Shroom1Q5SX79 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.78■□□□□ 0.44
Shroom1Q5SX79 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shroom1Q5SX79 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.78■□□□□ 0.44
Shroom1Q5SX79 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Shroom1Q5SX79 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shroom1Q5SX79 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shroom1Q5SX79 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Shroom1Q5SX79 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.78■□□□□ 0.44
Shroom1Q5SX79 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shroom1Q5SX79 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Shroom1Q5SX79 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shroom1Q5SX79 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shroom1Q5SX79 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Shroom1Q5SX79 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Shroom1Q5SX79 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.77■□□□□ 0.44
Shroom1Q5SX79 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Shroom1Q5SX79 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shroom1Q5SX79 Gm27000-201ENSMUST00000182943 842 ntBASIC17.77■□□□□ 0.44
Shroom1Q5SX79 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Shroom1Q5SX79 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.77■□□□□ 0.44
Shroom1Q5SX79 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shroom1Q5SX79 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Shroom1Q5SX79 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shroom1Q5SX79 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shroom1Q5SX79 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shroom1Q5SX79 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.77■□□□□ 0.43
Shroom1Q5SX79 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Shroom1Q5SX79 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Shroom1Q5SX79 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Shroom1Q5SX79 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Shroom1Q5SX79 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Shroom1Q5SX79 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Shroom1Q5SX79 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom1Q5SX79 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom1Q5SX79 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom1Q5SX79 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Shroom1Q5SX79 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom1Q5SX79 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom1Q5SX79 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom1Q5SX79 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.76■□□□□ 0.43
Shroom1Q5SX79 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom1Q5SX79 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom1Q5SX79 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom1Q5SX79 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom1Q5SX79 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom1Q5SX79 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom1Q5SX79 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom1Q5SX79 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom1Q5SX79 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom1Q5SX79 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.76■□□□□ 0.43
Shroom1Q5SX79 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom1Q5SX79 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Shroom1Q5SX79 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shroom1Q5SX79 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Shroom1Q5SX79 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shroom1Q5SX79 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shroom1Q5SX79 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shroom1Q5SX79 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shroom1Q5SX79 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shroom1Q5SX79 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shroom1Q5SX79 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Shroom1Q5SX79 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Shroom1Q5SX79 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shroom1Q5SX79 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Shroom1Q5SX79 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Shroom1Q5SX79 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Shroom1Q5SX79 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Shroom1Q5SX79 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Shroom1Q5SX79 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Shroom1Q5SX79 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms