Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf43Q5NCP0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf43Q5NCP0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rnf43Q5NCP0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17■□□□□ 0.31
Rnf43Q5NCP0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf43Q5NCP0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Rnf43Q5NCP0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17■□□□□ 0.31
Rnf43Q5NCP0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rnf43Q5NCP0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rnf43Q5NCP0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf43Q5NCP0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rnf43Q5NCP0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Rnf43Q5NCP0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf43Q5NCP0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf43Q5NCP0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf43Q5NCP0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Rnf43Q5NCP0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf43Q5NCP0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Rnf43Q5NCP0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Rnf43Q5NCP0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf43Q5NCP0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf43Q5NCP0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.99■□□□□ 0.31
Rnf43Q5NCP0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf43Q5NCP0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf43Q5NCP0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf43Q5NCP0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf43Q5NCP0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.99■□□□□ 0.31
Rnf43Q5NCP0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf43Q5NCP0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf43Q5NCP0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Rnf43Q5NCP0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.99■□□□□ 0.31
Rnf43Q5NCP0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
Rnf43Q5NCP0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf43Q5NCP0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf43Q5NCP0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf43Q5NCP0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf43Q5NCP0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf43Q5NCP0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf43Q5NCP0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf43Q5NCP0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf43Q5NCP0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf43Q5NCP0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Rnf43Q5NCP0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf43Q5NCP0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf43Q5NCP0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rnf43Q5NCP0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf43Q5NCP0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf43Q5NCP0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf43Q5NCP0 Rprl3-201ENSMUST00000157400 290 ntBASIC16.98■□□□□ 0.31
Rnf43Q5NCP0 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.98■□□□□ 0.31
Rnf43Q5NCP0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.98■□□□□ 0.31
Rnf43Q5NCP0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf43Q5NCP0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf43Q5NCP0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf43Q5NCP0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf43Q5NCP0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf43Q5NCP0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf43Q5NCP0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.98■□□□□ 0.31
Rnf43Q5NCP0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf43Q5NCP0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Rnf43Q5NCP0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf43Q5NCP0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.97■□□□□ 0.31
Rnf43Q5NCP0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf43Q5NCP0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf43Q5NCP0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf43Q5NCP0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf43Q5NCP0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf43Q5NCP0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf43Q5NCP0 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.97■□□□□ 0.31
Rnf43Q5NCP0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.97■□□□□ 0.31
Rnf43Q5NCP0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf43Q5NCP0 Gm12644-201ENSMUST00000119935 606 ntBASIC16.97■□□□□ 0.31
Rnf43Q5NCP0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.97■□□□□ 0.31
Rnf43Q5NCP0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf43Q5NCP0 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.97■□□□□ 0.31
Rnf43Q5NCP0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf43Q5NCP0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf43Q5NCP0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf43Q5NCP0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf43Q5NCP0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf43Q5NCP0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf43Q5NCP0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf43Q5NCP0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf43Q5NCP0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.96■□□□□ 0.31
Rnf43Q5NCP0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf43Q5NCP0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.96■□□□□ 0.31
Rnf43Q5NCP0 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.96■□□□□ 0.31
Rnf43Q5NCP0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf43Q5NCP0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf43Q5NCP0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf43Q5NCP0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf43Q5NCP0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf43Q5NCP0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf43Q5NCP0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Rnf43Q5NCP0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Rnf43Q5NCP0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
Rnf43Q5NCP0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms