Protein–RNA interactions for Protein: Q5NC48

Gm12253, Predicted gene 12253, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12253Q5NC48 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.37□□□□□ -0.11
Gm12253Q5NC48 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm12253Q5NC48 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm12253Q5NC48 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Gm12253Q5NC48 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Gm45328-201ENSMUST00000210942 917 ntBASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12253Q5NC48 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Gm13216-201ENSMUST00000117145 591 ntBASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Gm27742-201ENSMUST00000184667 60 ntBASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12253Q5NC48 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12253Q5NC48 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12253Q5NC48 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12253Q5NC48 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.34□□□□□ -0.11
Gm12253Q5NC48 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12253Q5NC48 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Gm12253Q5NC48 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.34□□□□□ -0.11
Gm12253Q5NC48 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12253Q5NC48 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12253Q5NC48 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.34□□□□□ -0.11
Gm12253Q5NC48 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12253Q5NC48 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12253Q5NC48 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.34□□□□□ -0.11
Gm12253Q5NC48 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gm12253Q5NC48 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Gm12253Q5NC48 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12253Q5NC48 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12253Q5NC48 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.34□□□□□ -0.11
Gm12253Q5NC48 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12253Q5NC48 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.34□□□□□ -0.11
Gm12253Q5NC48 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12253Q5NC48 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm12253Q5NC48 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Gm12253Q5NC48 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm12253Q5NC48 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm12253Q5NC48 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm12253Q5NC48 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Gm12253Q5NC48 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm12253Q5NC48 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12253Q5NC48 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12253Q5NC48 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12253Q5NC48 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12253Q5NC48 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12253Q5NC48 Mir3081-201ENSMUST00000175305 84 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms