Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Usp48Q3V0C5 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp48Q3V0C5 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Usp48Q3V0C5 Gm10052-201ENSMUST00000168019 960 ntBASIC20.66■□□□□ 0.9
Usp48Q3V0C5 Gm7729-201ENSMUST00000050143 801 ntBASIC20.66■□□□□ 0.9
Usp48Q3V0C5 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC20.66■□□□□ 0.9
Usp48Q3V0C5 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp48Q3V0C5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Usp48Q3V0C5 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp48Q3V0C5 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp48Q3V0C5 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp48Q3V0C5 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp48Q3V0C5 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp48Q3V0C5 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Usp48Q3V0C5 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp48Q3V0C5 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Usp48Q3V0C5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Usp48Q3V0C5 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Usp48Q3V0C5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp48Q3V0C5 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp48Q3V0C5 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp48Q3V0C5 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp48Q3V0C5 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp48Q3V0C5 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Usp48Q3V0C5 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC20.65■□□□□ 0.9
Usp48Q3V0C5 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Usp48Q3V0C5 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.65■□□□□ 0.9
Usp48Q3V0C5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.65■□□□□ 0.9
Usp48Q3V0C5 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Usp48Q3V0C5 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.64■□□□□ 0.9
Usp48Q3V0C5 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Usp48Q3V0C5 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Usp48Q3V0C5 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Usp48Q3V0C5 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Usp48Q3V0C5 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Usp48Q3V0C5 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.64■□□□□ 0.89
Usp48Q3V0C5 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp48Q3V0C5 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp48Q3V0C5 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp48Q3V0C5 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp48Q3V0C5 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.64■□□□□ 0.89
Usp48Q3V0C5 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp48Q3V0C5 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp48Q3V0C5 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp48Q3V0C5 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.64■□□□□ 0.89
Usp48Q3V0C5 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp48Q3V0C5 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Usp48Q3V0C5 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp48Q3V0C5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp48Q3V0C5 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Usp48Q3V0C5 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp48Q3V0C5 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC20.63■□□□□ 0.89
Usp48Q3V0C5 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp48Q3V0C5 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Usp48Q3V0C5 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Usp48Q3V0C5 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Usp48Q3V0C5 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp48Q3V0C5 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp48Q3V0C5 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp48Q3V0C5 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20.63■□□□□ 0.89
Usp48Q3V0C5 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.62■□□□□ 0.89
Usp48Q3V0C5 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp48Q3V0C5 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp48Q3V0C5 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Usp48Q3V0C5 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Usp48Q3V0C5 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Usp48Q3V0C5 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp48Q3V0C5 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp48Q3V0C5 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC20.62■□□□□ 0.89
Usp48Q3V0C5 Gm29791-202ENSMUST00000207888 369 ntBASIC20.62■□□□□ 0.89
Usp48Q3V0C5 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.62■□□□□ 0.89
Usp48Q3V0C5 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp48Q3V0C5 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.62■□□□□ 0.89
Usp48Q3V0C5 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp48Q3V0C5 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp48Q3V0C5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp48Q3V0C5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp48Q3V0C5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp48Q3V0C5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp48Q3V0C5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp48Q3V0C5 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp48Q3V0C5 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Usp48Q3V0C5 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.61■□□□□ 0.89
Usp48Q3V0C5 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.61■□□□□ 0.89
Usp48Q3V0C5 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp48Q3V0C5 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp48Q3V0C5 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Usp48Q3V0C5 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC20.61■□□□□ 0.89
Usp48Q3V0C5 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp48Q3V0C5 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC20.61■□□□□ 0.89
Usp48Q3V0C5 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC20.61■□□□□ 0.89
Usp48Q3V0C5 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp48Q3V0C5 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Usp48Q3V0C5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp48Q3V0C5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp48Q3V0C5 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Usp48Q3V0C5 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC20.6■□□□□ 0.89
Usp48Q3V0C5 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp48Q3V0C5 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Usp48Q3V0C5 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms