Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Naf1Q3UMQ8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17■□□□□ 0.31
Naf1Q3UMQ8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Naf1Q3UMQ8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Naf1Q3UMQ8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Naf1Q3UMQ8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Naf1Q3UMQ8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Naf1Q3UMQ8 Olfr129-201ENSMUST00000122318 993 ntBASIC16.99■□□□□ 0.31
Naf1Q3UMQ8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Naf1Q3UMQ8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Naf1Q3UMQ8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Naf1Q3UMQ8 Gm44450-201ENSMUST00000199528 114 ntBASIC16.99■□□□□ 0.31
Naf1Q3UMQ8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Naf1Q3UMQ8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.99■□□□□ 0.31
Naf1Q3UMQ8 Gm18115-201ENSMUST00000221209 621 ntBASIC16.99■□□□□ 0.31
Naf1Q3UMQ8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Naf1Q3UMQ8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Naf1Q3UMQ8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Naf1Q3UMQ8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Naf1Q3UMQ8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Naf1Q3UMQ8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Naf1Q3UMQ8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Naf1Q3UMQ8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Naf1Q3UMQ8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Naf1Q3UMQ8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Naf1Q3UMQ8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.98■□□□□ 0.31
Naf1Q3UMQ8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.98■□□□□ 0.31
Naf1Q3UMQ8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Naf1Q3UMQ8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Naf1Q3UMQ8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Naf1Q3UMQ8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Naf1Q3UMQ8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Naf1Q3UMQ8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.98■□□□□ 0.31
Naf1Q3UMQ8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Naf1Q3UMQ8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.98■□□□□ 0.31
Naf1Q3UMQ8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Naf1Q3UMQ8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Naf1Q3UMQ8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Naf1Q3UMQ8 Gm27357-201ENSMUST00000183754 135 ntBASIC16.98■□□□□ 0.31
Naf1Q3UMQ8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.98■□□□□ 0.31
Naf1Q3UMQ8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Naf1Q3UMQ8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Naf1Q3UMQ8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Naf1Q3UMQ8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Naf1Q3UMQ8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Naf1Q3UMQ8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Naf1Q3UMQ8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Naf1Q3UMQ8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Naf1Q3UMQ8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Naf1Q3UMQ8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Naf1Q3UMQ8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Naf1Q3UMQ8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Naf1Q3UMQ8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Naf1Q3UMQ8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Naf1Q3UMQ8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Naf1Q3UMQ8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Naf1Q3UMQ8 Gm15794-201ENSMUST00000120182 631 ntBASIC16.97■□□□□ 0.31
Naf1Q3UMQ8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Naf1Q3UMQ8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Naf1Q3UMQ8 Gm45328-201ENSMUST00000210942 917 ntBASIC16.97■□□□□ 0.31
Naf1Q3UMQ8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Naf1Q3UMQ8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Naf1Q3UMQ8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Naf1Q3UMQ8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Naf1Q3UMQ8 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.96■□□□□ 0.31
Naf1Q3UMQ8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Naf1Q3UMQ8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Naf1Q3UMQ8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Naf1Q3UMQ8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Naf1Q3UMQ8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Naf1Q3UMQ8 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Naf1Q3UMQ8 Gm17971-201ENSMUST00000190239 806 ntBASIC16.96■□□□□ 0.31
Naf1Q3UMQ8 Gm18669-201ENSMUST00000216049 778 ntBASIC16.96■□□□□ 0.31
Naf1Q3UMQ8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Naf1Q3UMQ8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Naf1Q3UMQ8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Naf1Q3UMQ8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Naf1Q3UMQ8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Naf1Q3UMQ8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Naf1Q3UMQ8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Naf1Q3UMQ8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Naf1Q3UMQ8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Naf1Q3UMQ8 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Naf1Q3UMQ8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Naf1Q3UMQ8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Naf1Q3UMQ8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Naf1Q3UMQ8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Naf1Q3UMQ8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Naf1Q3UMQ8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Naf1Q3UMQ8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Naf1Q3UMQ8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Naf1Q3UMQ8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.95■□□□□ 0.3
Naf1Q3UMQ8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.95■□□□□ 0.3
Naf1Q3UMQ8 Mir3081-201ENSMUST00000175305 84 ntBASIC16.95■□□□□ 0.3
Naf1Q3UMQ8 Gm27741-201ENSMUST00000185060 237 ntBASIC16.95■□□□□ 0.3
Naf1Q3UMQ8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Naf1Q3UMQ8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.95■□□□□ 0.3
Naf1Q3UMQ8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Naf1Q3UMQ8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Naf1Q3UMQ8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms