Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf44Q3UHJ8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf44Q3UHJ8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf44Q3UHJ8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf44Q3UHJ8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rnf44Q3UHJ8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf44Q3UHJ8 Gm13186-201ENSMUST00000118031 316 ntBASIC16.16■□□□□ 0.18
Rnf44Q3UHJ8 Gm21559-201ENSMUST00000220638 855 ntBASIC16.16■□□□□ 0.18
Rnf44Q3UHJ8 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.16■□□□□ 0.18
Rnf44Q3UHJ8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf44Q3UHJ8 Gm8587-201ENSMUST00000076538 843 ntBASIC16.16■□□□□ 0.18
Rnf44Q3UHJ8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rnf44Q3UHJ8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf44Q3UHJ8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.16■□□□□ 0.18
Rnf44Q3UHJ8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf44Q3UHJ8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf44Q3UHJ8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf44Q3UHJ8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf44Q3UHJ8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 Gm26039-201ENSMUST00000158152 144 ntBASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 Gm27389-201ENSMUST00000183622 195 ntBASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf44Q3UHJ8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rnf44Q3UHJ8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf44Q3UHJ8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf44Q3UHJ8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf44Q3UHJ8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Rnf44Q3UHJ8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.14■□□□□ 0.17
Rnf44Q3UHJ8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf44Q3UHJ8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf44Q3UHJ8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf44Q3UHJ8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf44Q3UHJ8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf44Q3UHJ8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf44Q3UHJ8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Rnf44Q3UHJ8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf44Q3UHJ8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.14■□□□□ 0.17
Rnf44Q3UHJ8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf44Q3UHJ8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rnf44Q3UHJ8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf44Q3UHJ8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf44Q3UHJ8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rnf44Q3UHJ8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf44Q3UHJ8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf44Q3UHJ8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf44Q3UHJ8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.13■□□□□ 0.17
Rnf44Q3UHJ8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf44Q3UHJ8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.13■□□□□ 0.17
Rnf44Q3UHJ8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.13■□□□□ 0.17
Rnf44Q3UHJ8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rnf44Q3UHJ8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf44Q3UHJ8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf44Q3UHJ8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf44Q3UHJ8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf44Q3UHJ8 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.13■□□□□ 0.17
Rnf44Q3UHJ8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf44Q3UHJ8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf44Q3UHJ8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf44Q3UHJ8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.13■□□□□ 0.17
Rnf44Q3UHJ8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.13■□□□□ 0.17
Rnf44Q3UHJ8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf44Q3UHJ8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf44Q3UHJ8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf44Q3UHJ8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf44Q3UHJ8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf44Q3UHJ8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf44Q3UHJ8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf44Q3UHJ8 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.12■□□□□ 0.17
Rnf44Q3UHJ8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf44Q3UHJ8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf44Q3UHJ8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rnf44Q3UHJ8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.12■□□□□ 0.17
Rnf44Q3UHJ8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.12■□□□□ 0.17
Rnf44Q3UHJ8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf44Q3UHJ8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Rnf44Q3UHJ8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf44Q3UHJ8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms