Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ptchd3Q0EEE2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ptchd3Q0EEE2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptchd3Q0EEE2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ptchd3Q0EEE2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ptchd3Q0EEE2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptchd3Q0EEE2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ptchd3Q0EEE2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Ptchd3Q0EEE2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptchd3Q0EEE2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ptchd3Q0EEE2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ptchd3Q0EEE2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ptchd3Q0EEE2 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ptchd3Q0EEE2 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ptchd3Q0EEE2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ptchd3Q0EEE2 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ptchd3Q0EEE2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ptchd3Q0EEE2 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.18■□□□□ 0.18
Ptchd3Q0EEE2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ptchd3Q0EEE2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ptchd3Q0EEE2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.18■□□□□ 0.18
Ptchd3Q0EEE2 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.18■□□□□ 0.18
Ptchd3Q0EEE2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ptchd3Q0EEE2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ptchd3Q0EEE2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ptchd3Q0EEE2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ptchd3Q0EEE2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ptchd3Q0EEE2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ptchd3Q0EEE2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ptchd3Q0EEE2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ptchd3Q0EEE2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ptchd3Q0EEE2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ptchd3Q0EEE2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ptchd3Q0EEE2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ptchd3Q0EEE2 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.17■□□□□ 0.18
Ptchd3Q0EEE2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ptchd3Q0EEE2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ptchd3Q0EEE2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ptchd3Q0EEE2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ptchd3Q0EEE2 Mir6349-201ENSMUST00000184059 97 ntBASIC16.17■□□□□ 0.18
Ptchd3Q0EEE2 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.17■□□□□ 0.18
Ptchd3Q0EEE2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ptchd3Q0EEE2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ptchd3Q0EEE2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ptchd3Q0EEE2 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
Ptchd3Q0EEE2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ptchd3Q0EEE2 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ptchd3Q0EEE2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
Ptchd3Q0EEE2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.17■□□□□ 0.18
Ptchd3Q0EEE2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ptchd3Q0EEE2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ptchd3Q0EEE2 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ptchd3Q0EEE2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ptchd3Q0EEE2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ptchd3Q0EEE2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.16■□□□□ 0.18
Ptchd3Q0EEE2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ptchd3Q0EEE2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.16■□□□□ 0.18
Ptchd3Q0EEE2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ptchd3Q0EEE2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ptchd3Q0EEE2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ptchd3Q0EEE2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ptchd3Q0EEE2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ptchd3Q0EEE2 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.16■□□□□ 0.18
Ptchd3Q0EEE2 Gm10653-202ENSMUST00000139570 835 ntBASIC16.16■□□□□ 0.18
Ptchd3Q0EEE2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ptchd3Q0EEE2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ptchd3Q0EEE2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ptchd3Q0EEE2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ptchd3Q0EEE2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Ptchd3Q0EEE2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ptchd3Q0EEE2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ptchd3Q0EEE2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.16■□□□□ 0.18
Ptchd3Q0EEE2 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ptchd3Q0EEE2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ptchd3Q0EEE2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ptchd3Q0EEE2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ptchd3Q0EEE2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Ptchd3Q0EEE2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ptchd3Q0EEE2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ptchd3Q0EEE2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ptchd3Q0EEE2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ptchd3Q0EEE2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.15■□□□□ 0.18
Ptchd3Q0EEE2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ptchd3Q0EEE2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.15■□□□□ 0.18
Ptchd3Q0EEE2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ptchd3Q0EEE2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.15■□□□□ 0.18
Ptchd3Q0EEE2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ptchd3Q0EEE2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ptchd3Q0EEE2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ptchd3Q0EEE2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.15■□□□□ 0.18
Ptchd3Q0EEE2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ptchd3Q0EEE2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.15■□□□□ 0.18
Ptchd3Q0EEE2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ptchd3Q0EEE2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ptchd3Q0EEE2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ptchd3Q0EEE2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ptchd3Q0EEE2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ptchd3Q0EEE2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.15■□□□□ 0.18
Ptchd3Q0EEE2 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ptchd3Q0EEE2 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms