Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hspg2Q05793 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.31□□□□□ -0.44
Hspg2Q05793 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hspg2Q05793 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hspg2Q05793 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hspg2Q05793 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hspg2Q05793 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.31□□□□□ -0.44
Hspg2Q05793 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.31□□□□□ -0.44
Hspg2Q05793 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hspg2Q05793 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hspg2Q05793 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hspg2Q05793 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Hspg2Q05793 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hspg2Q05793 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hspg2Q05793 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hspg2Q05793 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hspg2Q05793 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hspg2Q05793 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Hspg2Q05793 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hspg2Q05793 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Hspg2Q05793 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hspg2Q05793 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Hspg2Q05793 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.3□□□□□ -0.44
Hspg2Q05793 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hspg2Q05793 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Hspg2Q05793 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hspg2Q05793 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hspg2Q05793 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hspg2Q05793 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hspg2Q05793 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.29□□□□□ -0.44
Hspg2Q05793 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.29□□□□□ -0.44
Hspg2Q05793 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.29□□□□□ -0.44
Hspg2Q05793 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hspg2Q05793 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hspg2Q05793 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hspg2Q05793 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Hspg2Q05793 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.29□□□□□ -0.44
Hspg2Q05793 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hspg2Q05793 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.29□□□□□ -0.44
Hspg2Q05793 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hspg2Q05793 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hspg2Q05793 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hspg2Q05793 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Hspg2Q05793 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hspg2Q05793 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Hspg2Q05793 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hspg2Q05793 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hspg2Q05793 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hspg2Q05793 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hspg2Q05793 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hspg2Q05793 Gm13312-201ENSMUST00000119631 718 ntBASIC12.28□□□□□ -0.44
Hspg2Q05793 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hspg2Q05793 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hspg2Q05793 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hspg2Q05793 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hspg2Q05793 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hspg2Q05793 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hspg2Q05793 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hspg2Q05793 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hspg2Q05793 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Hspg2Q05793 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hspg2Q05793 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hspg2Q05793 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Hspg2Q05793 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hspg2Q05793 Gm12260-201ENSMUST00000122447 411 ntBASIC12.28□□□□□ -0.44
Hspg2Q05793 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hspg2Q05793 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hspg2Q05793 Mir6956-201ENSMUST00000183598 62 ntBASIC12.28□□□□□ -0.44
Hspg2Q05793 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.28□□□□□ -0.44
Hspg2Q05793 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hspg2Q05793 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hspg2Q05793 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hspg2Q05793 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hspg2Q05793 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.28□□□□□ -0.44
Hspg2Q05793 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hspg2Q05793 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hspg2Q05793 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hspg2Q05793 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Hspg2Q05793 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Hspg2Q05793 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hspg2Q05793 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hspg2Q05793 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Hspg2Q05793 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hspg2Q05793 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hspg2Q05793 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Hspg2Q05793 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hspg2Q05793 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Hspg2Q05793 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hspg2Q05793 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hspg2Q05793 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.27□□□□□ -0.44
Hspg2Q05793 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hspg2Q05793 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC12.27□□□□□ -0.44
Hspg2Q05793 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Hspg2Q05793 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hspg2Q05793 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.27□□□□□ -0.45
Hspg2Q05793 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.27□□□□□ -0.45
Hspg2Q05793 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.27□□□□□ -0.45
Hspg2Q05793 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Hspg2Q05793 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hspg2Q05793 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms