Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Smarcc1P97496 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcc1P97496 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcc1P97496 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Smarcc1P97496 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcc1P97496 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.86■□□□□ 0.93
Smarcc1P97496 Gm15467-201ENSMUST00000120582 445 ntBASIC20.86■□□□□ 0.93
Smarcc1P97496 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Smarcc1P97496 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcc1P97496 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC20.86■□□□□ 0.93
Smarcc1P97496 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcc1P97496 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.86■□□□□ 0.93
Smarcc1P97496 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC20.86■□□□□ 0.93
Smarcc1P97496 Psmb5-202ENSMUST00000227257 622 ntBASIC20.86■□□□□ 0.93
Smarcc1P97496 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcc1P97496 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.86■□□□□ 0.93
Smarcc1P97496 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcc1P97496 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcc1P97496 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
Smarcc1P97496 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcc1P97496 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcc1P97496 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcc1P97496 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcc1P97496 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcc1P97496 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcc1P97496 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcc1P97496 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Smarcc1P97496 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcc1P97496 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcc1P97496 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcc1P97496 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.85■□□□□ 0.93
Smarcc1P97496 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.85■□□□□ 0.93
Smarcc1P97496 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcc1P97496 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Smarcc1P97496 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.85■□□□□ 0.93
Smarcc1P97496 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcc1P97496 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcc1P97496 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcc1P97496 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcc1P97496 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcc1P97496 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcc1P97496 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcc1P97496 Gm25990-201ENSMUST00000102440 86 ntBASIC20.84■□□□□ 0.93
Smarcc1P97496 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcc1P97496 Gm13418-201ENSMUST00000119097 944 ntBASIC20.84■□□□□ 0.93
Smarcc1P97496 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC20.84■□□□□ 0.93
Smarcc1P97496 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcc1P97496 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcc1P97496 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC20.84■□□□□ 0.93
Smarcc1P97496 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC20.84■□□□□ 0.93
Smarcc1P97496 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcc1P97496 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcc1P97496 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Smarcc1P97496 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcc1P97496 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcc1P97496 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcc1P97496 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcc1P97496 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcc1P97496 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcc1P97496 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcc1P97496 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcc1P97496 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcc1P97496 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Smarcc1P97496 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcc1P97496 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcc1P97496 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Smarcc1P97496 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcc1P97496 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.83■□□□□ 0.93
Smarcc1P97496 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
Smarcc1P97496 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcc1P97496 Gm15173-201ENSMUST00000122049 433 ntBASIC20.83■□□□□ 0.93
Smarcc1P97496 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcc1P97496 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.83■□□□□ 0.93
Smarcc1P97496 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcc1P97496 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcc1P97496 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Smarcc1P97496 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Smarcc1P97496 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Smarcc1P97496 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smarcc1P97496 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Smarcc1P97496 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Smarcc1P97496 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Smarcc1P97496 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smarcc1P97496 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smarcc1P97496 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc1P97496 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc1P97496 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc1P97496 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc1P97496 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc1P97496 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc1P97496 Gm6736-201ENSMUST00000166583 948 ntBASIC20.82■□□□□ 0.92
Smarcc1P97496 Gm7230-201ENSMUST00000173026 815 ntBASIC20.82■□□□□ 0.92
Smarcc1P97496 Gm4535-201ENSMUST00000182274 558 ntBASIC20.82■□□□□ 0.92
Smarcc1P97496 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC20.82■□□□□ 0.92
Smarcc1P97496 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.82■□□□□ 0.92
Smarcc1P97496 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC20.82■□□□□ 0.92
Smarcc1P97496 Gm7506-201ENSMUST00000207758 815 ntBASIC20.82■□□□□ 0.92
Smarcc1P97496 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc1P97496 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc1P97496 Gm10355-201ENSMUST00000097146 517 ntBASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms