Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
PrkdcP97313 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.45□□□□□ -0.58
PrkdcP97313 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
PrkdcP97313 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PrkdcP97313 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
PrkdcP97313 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
PrkdcP97313 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PrkdcP97313 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.44□□□□□ -0.58
PrkdcP97313 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
PrkdcP97313 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PrkdcP97313 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
PrkdcP97313 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PrkdcP97313 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PrkdcP97313 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
PrkdcP97313 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.44□□□□□ -0.58
PrkdcP97313 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC11.44□□□□□ -0.58
PrkdcP97313 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PrkdcP97313 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
PrkdcP97313 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PrkdcP97313 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
PrkdcP97313 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.44□□□□□ -0.58
PrkdcP97313 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PrkdcP97313 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.44□□□□□ -0.58
PrkdcP97313 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PrkdcP97313 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
PrkdcP97313 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
PrkdcP97313 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PrkdcP97313 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PrkdcP97313 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PrkdcP97313 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.43□□□□□ -0.58
PrkdcP97313 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
PrkdcP97313 Gm29707-201ENSMUST00000196325 491 ntBASIC11.43□□□□□ -0.58
PrkdcP97313 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.43□□□□□ -0.58
PrkdcP97313 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PrkdcP97313 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PrkdcP97313 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PrkdcP97313 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
PrkdcP97313 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PrkdcP97313 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
PrkdcP97313 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PrkdcP97313 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PrkdcP97313 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.43□□□□□ -0.58
PrkdcP97313 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PrkdcP97313 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
PrkdcP97313 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PrkdcP97313 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PrkdcP97313 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PrkdcP97313 Gm27437-201ENSMUST00000183429 107 ntBASIC11.43□□□□□ -0.58
PrkdcP97313 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
PrkdcP97313 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
PrkdcP97313 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.43□□□□□ -0.58
PrkdcP97313 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
PrkdcP97313 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PrkdcP97313 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PrkdcP97313 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PrkdcP97313 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PrkdcP97313 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PrkdcP97313 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.42□□□□□ -0.58
PrkdcP97313 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PrkdcP97313 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.42□□□□□ -0.58
PrkdcP97313 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PrkdcP97313 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PrkdcP97313 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PrkdcP97313 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.42□□□□□ -0.58
PrkdcP97313 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PrkdcP97313 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PrkdcP97313 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.42□□□□□ -0.58
PrkdcP97313 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.42□□□□□ -0.58
PrkdcP97313 Gm8655-201ENSMUST00000221159 852 ntBASIC11.42□□□□□ -0.58
PrkdcP97313 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PrkdcP97313 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PrkdcP97313 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PrkdcP97313 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PrkdcP97313 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PrkdcP97313 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PrkdcP97313 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PrkdcP97313 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
PrkdcP97313 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
PrkdcP97313 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
PrkdcP97313 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.42□□□□□ -0.58
PrkdcP97313 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PrkdcP97313 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
PrkdcP97313 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PrkdcP97313 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
PrkdcP97313 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PrkdcP97313 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
PrkdcP97313 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
PrkdcP97313 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC11.42□□□□□ -0.58
PrkdcP97313 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PrkdcP97313 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PrkdcP97313 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PrkdcP97313 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PrkdcP97313 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
PrkdcP97313 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
PrkdcP97313 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
PrkdcP97313 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
PrkdcP97313 Gm25406-201ENSMUST00000157599 105 ntBASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms