Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ThraP63058 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.93■□□□□ 0.3
ThraP63058 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ThraP63058 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ThraP63058 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ThraP63058 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
ThraP63058 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ThraP63058 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ThraP63058 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ThraP63058 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ThraP63058 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
ThraP63058 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ThraP63058 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
ThraP63058 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
ThraP63058 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ThraP63058 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
ThraP63058 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ThraP63058 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ThraP63058 Gm7367-201ENSMUST00000057611 492 ntBASIC16.92■□□□□ 0.3
ThraP63058 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ThraP63058 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ThraP63058 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.92■□□□□ 0.3
ThraP63058 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ThraP63058 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ThraP63058 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ThraP63058 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ThraP63058 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ThraP63058 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.91■□□□□ 0.3
ThraP63058 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ThraP63058 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ThraP63058 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ThraP63058 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ThraP63058 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ThraP63058 Gm13401-201ENSMUST00000117074 291 ntBASIC16.91■□□□□ 0.3
ThraP63058 Gm13216-201ENSMUST00000117145 591 ntBASIC16.91■□□□□ 0.3
ThraP63058 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.91■□□□□ 0.3
ThraP63058 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.91■□□□□ 0.3
ThraP63058 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.91■□□□□ 0.3
ThraP63058 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ThraP63058 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.91■□□□□ 0.3
ThraP63058 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ThraP63058 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
ThraP63058 Gm10819-201ENSMUST00000099988 561 ntBASIC16.91■□□□□ 0.3
ThraP63058 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ThraP63058 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ThraP63058 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ThraP63058 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.91■□□□□ 0.3
ThraP63058 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ThraP63058 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ThraP63058 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.9■□□□□ 0.3
ThraP63058 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ThraP63058 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ThraP63058 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ThraP63058 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ThraP63058 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ThraP63058 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
ThraP63058 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ThraP63058 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ThraP63058 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.9■□□□□ 0.3
ThraP63058 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ThraP63058 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ThraP63058 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ThraP63058 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
ThraP63058 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ThraP63058 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.9■□□□□ 0.3
ThraP63058 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ThraP63058 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ThraP63058 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ThraP63058 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ThraP63058 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ThraP63058 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ThraP63058 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ThraP63058 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ThraP63058 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ThraP63058 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ThraP63058 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ThraP63058 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ThraP63058 AA414768-201ENSMUST00000121924 1257 ntBASIC16.89■□□□□ 0.29
ThraP63058 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.89■□□□□ 0.29
ThraP63058 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.89■□□□□ 0.29
ThraP63058 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.89■□□□□ 0.29
ThraP63058 Gm18101-201ENSMUST00000215769 548 ntBASIC16.89■□□□□ 0.29
ThraP63058 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
ThraP63058 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ThraP63058 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ThraP63058 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ThraP63058 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.89■□□□□ 0.29
ThraP63058 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ThraP63058 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.89■□□□□ 0.29
ThraP63058 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ThraP63058 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.89■□□□□ 0.29
ThraP63058 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ThraP63058 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ThraP63058 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.89■□□□□ 0.29
ThraP63058 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ThraP63058 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ThraP63058 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ThraP63058 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ThraP63058 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ThraP63058 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms