Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ybx1P62960 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ybx1P62960 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ybx1P62960 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.1■□□□□ 0.33
Ybx1P62960 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ybx1P62960 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Ybx1P62960 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Ybx1P62960 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.1■□□□□ 0.33
Ybx1P62960 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ybx1P62960 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ybx1P62960 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ybx1P62960 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ybx1P62960 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ybx1P62960 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ybx1P62960 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ybx1P62960 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ybx1P62960 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ybx1P62960 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ybx1P62960 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ybx1P62960 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ybx1P62960 Gm15372-201ENSMUST00000120729 834 ntBASIC17.09■□□□□ 0.33
Ybx1P62960 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ybx1P62960 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ybx1P62960 Gm29707-201ENSMUST00000196325 491 ntBASIC17.09■□□□□ 0.33
Ybx1P62960 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ybx1P62960 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ybx1P62960 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.09■□□□□ 0.33
Ybx1P62960 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ybx1P62960 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ybx1P62960 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ybx1P62960 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ybx1P62960 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Ybx1P62960 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ybx1P62960 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ybx1P62960 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ybx1P62960 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ybx1P62960 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ybx1P62960 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ybx1P62960 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ybx1P62960 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ybx1P62960 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ybx1P62960 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ybx1P62960 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ybx1P62960 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ybx1P62960 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ybx1P62960 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Ybx1P62960 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ybx1P62960 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ybx1P62960 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ybx1P62960 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.08■□□□□ 0.32
Ybx1P62960 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ybx1P62960 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ybx1P62960 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ybx1P62960 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ybx1P62960 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.08■□□□□ 0.32
Ybx1P62960 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ybx1P62960 Gm10052-201ENSMUST00000168019 960 ntBASIC17.08■□□□□ 0.32
Ybx1P62960 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ybx1P62960 Gm7729-201ENSMUST00000050143 801 ntBASIC17.08■□□□□ 0.32
Ybx1P62960 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ybx1P62960 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ybx1P62960 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ybx1P62960 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ybx1P62960 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ybx1P62960 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ybx1P62960 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ybx1P62960 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ybx1P62960 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ybx1P62960 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ybx1P62960 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Ybx1P62960 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Ybx1P62960 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.07■□□□□ 0.32
Ybx1P62960 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.07■□□□□ 0.32
Ybx1P62960 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ybx1P62960 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ybx1P62960 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ybx1P62960 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ybx1P62960 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ybx1P62960 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ybx1P62960 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ybx1P62960 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ybx1P62960 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ybx1P62960 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.06■□□□□ 0.32
Ybx1P62960 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ybx1P62960 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ybx1P62960 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ybx1P62960 Gm12644-201ENSMUST00000119935 606 ntBASIC17.06■□□□□ 0.32
Ybx1P62960 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ybx1P62960 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.06■□□□□ 0.32
Ybx1P62960 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.06■□□□□ 0.32
Ybx1P62960 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ybx1P62960 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ybx1P62960 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.06■□□□□ 0.32
Ybx1P62960 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ybx1P62960 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ybx1P62960 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.06■□□□□ 0.32
Ybx1P62960 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Ybx1P62960 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ybx1P62960 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ybx1P62960 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms