Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Irf5P56477 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.76■□□□□ 0.75
Irf5P56477 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Irf5P56477 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Irf5P56477 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Irf5P56477 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Irf5P56477 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Irf5P56477 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Irf5P56477 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Irf5P56477 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Irf5P56477 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Irf5P56477 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Irf5P56477 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Irf5P56477 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Irf5P56477 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Irf5P56477 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Irf5P56477 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Irf5P56477 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Irf5P56477 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Irf5P56477 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Irf5P56477 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Irf5P56477 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Irf5P56477 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Irf5P56477 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Irf5P56477 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.75■□□□□ 0.75
Irf5P56477 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Irf5P56477 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Irf5P56477 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Irf5P56477 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.75■□□□□ 0.75
Irf5P56477 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Irf5P56477 Gm27742-201ENSMUST00000184667 60 ntBASIC19.75■□□□□ 0.75
Irf5P56477 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Irf5P56477 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Irf5P56477 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Irf5P56477 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Irf5P56477 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Irf5P56477 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Irf5P56477 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Irf5P56477 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf5P56477 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf5P56477 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf5P56477 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Irf5P56477 Gm24589-201ENSMUST00000116692 94 ntBASIC19.74■□□□□ 0.75
Irf5P56477 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf5P56477 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.74■□□□□ 0.75
Irf5P56477 Mzt1-203ENSMUST00000227948 952 ntBASIC19.74■□□□□ 0.75
Irf5P56477 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf5P56477 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.74■□□□□ 0.75
Irf5P56477 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.74■□□□□ 0.75
Irf5P56477 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Irf5P56477 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf5P56477 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Irf5P56477 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf5P56477 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf5P56477 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf5P56477 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf5P56477 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf5P56477 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Irf5P56477 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Irf5P56477 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf5P56477 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Irf5P56477 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Irf5P56477 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.73■□□□□ 0.75
Irf5P56477 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.73■□□□□ 0.75
Irf5P56477 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.73■□□□□ 0.75
Irf5P56477 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf5P56477 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Irf5P56477 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Irf5P56477 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf5P56477 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf5P56477 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Irf5P56477 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.72■□□□□ 0.75
Irf5P56477 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Irf5P56477 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf5P56477 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Irf5P56477 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf5P56477 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.72■□□□□ 0.75
Irf5P56477 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf5P56477 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Irf5P56477 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf5P56477 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf5P56477 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf5P56477 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf5P56477 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Irf5P56477 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf5P56477 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf5P56477 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf5P56477 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Irf5P56477 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Irf5P56477 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Irf5P56477 Gm37444-201ENSMUST00000193605 439 ntBASIC19.71■□□□□ 0.75
Irf5P56477 Gm43514-201ENSMUST00000198852 424 ntBASIC19.71■□□□□ 0.75
Irf5P56477 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.71■□□□□ 0.75
Irf5P56477 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.71■□□□□ 0.75
Irf5P56477 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Irf5P56477 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Irf5P56477 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf5P56477 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf5P56477 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf5P56477 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms