Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.13■□□□□ 0.49
SqleP52019 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SqleP52019 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.13■□□□□ 0.49
SqleP52019 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SqleP52019 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.13■□□□□ 0.49
SqleP52019 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SqleP52019 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SqleP52019 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SqleP52019 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SqleP52019 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SqleP52019 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SqleP52019 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SqleP52019 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
SqleP52019 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.12■□□□□ 0.49
SqleP52019 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SqleP52019 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SqleP52019 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SqleP52019 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SqleP52019 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SqleP52019 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.12■□□□□ 0.49
SqleP52019 Chchd1-203ENSMUST00000224633 557 ntBASIC18.12■□□□□ 0.49
SqleP52019 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SqleP52019 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SqleP52019 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SqleP52019 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SqleP52019 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SqleP52019 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SqleP52019 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SqleP52019 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SqleP52019 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SqleP52019 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.11■□□□□ 0.49
SqleP52019 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SqleP52019 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
SqleP52019 Gm44872-201ENSMUST00000207864 420 ntBASIC18.11■□□□□ 0.49
SqleP52019 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SqleP52019 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SqleP52019 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.11■□□□□ 0.49
SqleP52019 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SqleP52019 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SqleP52019 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SqleP52019 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SqleP52019 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SqleP52019 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SqleP52019 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.1■□□□□ 0.49
SqleP52019 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SqleP52019 Gm7222-201ENSMUST00000117512 906 ntBASIC18.1■□□□□ 0.49
SqleP52019 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.1■□□□□ 0.49
SqleP52019 Gm11025-201ENSMUST00000140773 466 ntBASIC18.1■□□□□ 0.49
SqleP52019 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.1■□□□□ 0.49
SqleP52019 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
SqleP52019 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.1■□□□□ 0.49
SqleP52019 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.1■□□□□ 0.49
SqleP52019 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.1■□□□□ 0.49
SqleP52019 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SqleP52019 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC18.1■□□□□ 0.49
SqleP52019 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SqleP52019 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SqleP52019 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SqleP52019 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SqleP52019 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SqleP52019 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SqleP52019 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SqleP52019 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
SqleP52019 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SqleP52019 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.09■□□□□ 0.49
SqleP52019 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SqleP52019 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SqleP52019 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SqleP52019 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SqleP52019 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SqleP52019 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SqleP52019 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SqleP52019 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SqleP52019 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SqleP52019 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.09■□□□□ 0.49
SqleP52019 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.09■□□□□ 0.49
SqleP52019 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.09■□□□□ 0.49
SqleP52019 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SqleP52019 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SqleP52019 Fst-202ENSMUST00000223640 2612 ntBASIC18.09■□□□□ 0.49
SqleP52019 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SqleP52019 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SqleP52019 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SqleP52019 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SqleP52019 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
SqleP52019 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.49
SqleP52019 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
SqleP52019 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SqleP52019 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.08■□□□□ 0.48
SqleP52019 Gm11780-201ENSMUST00000136880 516 ntBASIC18.08■□□□□ 0.48
SqleP52019 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
SqleP52019 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SqleP52019 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
SqleP52019 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SqleP52019 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SqleP52019 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SqleP52019 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SqleP52019 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SqleP52019 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SqleP52019 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms