Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lhx3P50481 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Lhx3P50481 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lhx3P50481 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Lhx3P50481 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.95■□□□□ 0.3
Lhx3P50481 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Lhx3P50481 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lhx3P50481 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Lhx3P50481 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lhx3P50481 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Lhx3P50481 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Lhx3P50481 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.95■□□□□ 0.3
Lhx3P50481 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Lhx3P50481 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.95■□□□□ 0.3
Lhx3P50481 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lhx3P50481 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lhx3P50481 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lhx3P50481 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lhx3P50481 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lhx3P50481 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx3P50481 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Lhx3P50481 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Lhx3P50481 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx3P50481 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx3P50481 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx3P50481 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx3P50481 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx3P50481 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx3P50481 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.94■□□□□ 0.3
Lhx3P50481 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx3P50481 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx3P50481 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.94■□□□□ 0.3
Lhx3P50481 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.94■□□□□ 0.3
Lhx3P50481 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx3P50481 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx3P50481 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx3P50481 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx3P50481 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx3P50481 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx3P50481 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Lhx3P50481 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx3P50481 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Lhx3P50481 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Lhx3P50481 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx3P50481 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx3P50481 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx3P50481 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx3P50481 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx3P50481 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Lhx3P50481 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx3P50481 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Lhx3P50481 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx3P50481 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx3P50481 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx3P50481 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx3P50481 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Lhx3P50481 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx3P50481 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Lhx3P50481 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
Lhx3P50481 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx3P50481 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx3P50481 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Lhx3P50481 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx3P50481 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx3P50481 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx3P50481 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx3P50481 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx3P50481 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx3P50481 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx3P50481 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx3P50481 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.92■□□□□ 0.3
Lhx3P50481 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx3P50481 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Lhx3P50481 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx3P50481 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Lhx3P50481 Gm7284-201ENSMUST00000131667 944 ntBASIC16.92■□□□□ 0.3
Lhx3P50481 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx3P50481 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx3P50481 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Lhx3P50481 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.92■□□□□ 0.3
Lhx3P50481 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx3P50481 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx3P50481 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx3P50481 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.92■□□□□ 0.3
Lhx3P50481 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx3P50481 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx3P50481 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx3P50481 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.92■□□□□ 0.3
Lhx3P50481 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Lhx3P50481 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Lhx3P50481 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx3P50481 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx3P50481 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Lhx3P50481 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Lhx3P50481 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx3P50481 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx3P50481 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx3P50481 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.91■□□□□ 0.3
Lhx3P50481 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx3P50481 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms