Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atoh1P48985 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
Atoh1P48985 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atoh1P48985 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.9■□□□□ 0.62
Atoh1P48985 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Atoh1P48985 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Atoh1P48985 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atoh1P48985 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atoh1P48985 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atoh1P48985 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Atoh1P48985 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atoh1P48985 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atoh1P48985 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.89■□□□□ 0.61
Atoh1P48985 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atoh1P48985 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.89■□□□□ 0.61
Atoh1P48985 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.89■□□□□ 0.61
Atoh1P48985 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Atoh1P48985 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.89■□□□□ 0.61
Atoh1P48985 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.89■□□□□ 0.61
Atoh1P48985 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.89■□□□□ 0.61
Atoh1P48985 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atoh1P48985 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.89■□□□□ 0.61
Atoh1P48985 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atoh1P48985 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atoh1P48985 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Atoh1P48985 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atoh1P48985 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atoh1P48985 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Atoh1P48985 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Atoh1P48985 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Atoh1P48985 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Atoh1P48985 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atoh1P48985 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atoh1P48985 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atoh1P48985 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Atoh1P48985 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Atoh1P48985 Gm14822-201ENSMUST00000122247 291 ntBASIC18.88■□□□□ 0.61
Atoh1P48985 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.88■□□□□ 0.61
Atoh1P48985 Gm6550-201ENSMUST00000187574 993 ntBASIC18.88■□□□□ 0.61
Atoh1P48985 Gm6089-201ENSMUST00000197666 938 ntBASIC18.88■□□□□ 0.61
Atoh1P48985 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.88■□□□□ 0.61
Atoh1P48985 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.88■□□□□ 0.61
Atoh1P48985 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atoh1P48985 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atoh1P48985 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atoh1P48985 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Atoh1P48985 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atoh1P48985 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.88■□□□□ 0.61
Atoh1P48985 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atoh1P48985 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atoh1P48985 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atoh1P48985 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atoh1P48985 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atoh1P48985 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atoh1P48985 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Atoh1P48985 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Atoh1P48985 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atoh1P48985 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Atoh1P48985 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atoh1P48985 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Atoh1P48985 Gm9727-201ENSMUST00000161387 555 ntBASIC18.87■□□□□ 0.61
Atoh1P48985 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Atoh1P48985 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atoh1P48985 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Atoh1P48985 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Atoh1P48985 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.87■□□□□ 0.61
Atoh1P48985 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atoh1P48985 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.87■□□□□ 0.61
Atoh1P48985 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atoh1P48985 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atoh1P48985 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atoh1P48985 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atoh1P48985 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Atoh1P48985 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Atoh1P48985 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atoh1P48985 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.87■□□□□ 0.61
Atoh1P48985 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atoh1P48985 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Atoh1P48985 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Atoh1P48985 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Atoh1P48985 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atoh1P48985 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atoh1P48985 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atoh1P48985 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.86■□□□□ 0.61
Atoh1P48985 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.86■□□□□ 0.61
Atoh1P48985 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Atoh1P48985 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.86■□□□□ 0.61
Atoh1P48985 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atoh1P48985 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atoh1P48985 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Atoh1P48985 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atoh1P48985 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atoh1P48985 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atoh1P48985 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atoh1P48985 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.86■□□□□ 0.61
Atoh1P48985 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.85■□□□□ 0.61
Atoh1P48985 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Atoh1P48985 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.85■□□□□ 0.61
Atoh1P48985 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atoh1P48985 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms