Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.75■□□□□ 0.59
Brca1P48754 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
Brca1P48754 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Brca1P48754 Chchd1-203ENSMUST00000224633 557 ntBASIC18.75■□□□□ 0.59
Brca1P48754 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brca1P48754 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.75■□□□□ 0.59
Brca1P48754 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.75■□□□□ 0.59
Brca1P48754 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.75■□□□□ 0.59
Brca1P48754 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Brca1P48754 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Brca1P48754 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca1P48754 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca1P48754 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca1P48754 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca1P48754 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca1P48754 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.74■□□□□ 0.59
Brca1P48754 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca1P48754 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca1P48754 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca1P48754 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca1P48754 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Brca1P48754 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca1P48754 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Brca1P48754 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Brca1P48754 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca1P48754 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca1P48754 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Brca1P48754 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca1P48754 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca1P48754 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Brca1P48754 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca1P48754 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Brca1P48754 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.74■□□□□ 0.59
Brca1P48754 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca1P48754 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca1P48754 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Brca1P48754 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca1P48754 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca1P48754 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca1P48754 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Brca1P48754 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca1P48754 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Brca1P48754 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Brca1P48754 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.73■□□□□ 0.59
Brca1P48754 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Brca1P48754 Gm8097-201ENSMUST00000117903 829 ntBASIC18.73■□□□□ 0.59
Brca1P48754 Gm6089-201ENSMUST00000197666 938 ntBASIC18.73■□□□□ 0.59
Brca1P48754 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.73■□□□□ 0.59
Brca1P48754 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Brca1P48754 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Brca1P48754 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Brca1P48754 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Brca1P48754 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Brca1P48754 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Brca1P48754 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Brca1P48754 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.73■□□□□ 0.59
Brca1P48754 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Brca1P48754 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Brca1P48754 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Brca1P48754 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.72■□□□□ 0.59
Brca1P48754 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.72■□□□□ 0.59
Brca1P48754 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.72■□□□□ 0.59
Brca1P48754 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.72■□□□□ 0.59
Brca1P48754 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Brca1P48754 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Brca1P48754 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Brca1P48754 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.72■□□□□ 0.59
Brca1P48754 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.72■□□□□ 0.59
Brca1P48754 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.72■□□□□ 0.59
Brca1P48754 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Brca1P48754 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Brca1P48754 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Brca1P48754 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Brca1P48754 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Brca1P48754 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.71■□□□□ 0.59
Brca1P48754 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Brca1P48754 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Brca1P48754 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Brca1P48754 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Brca1P48754 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Brca1P48754 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Brca1P48754 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Brca1P48754 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.7■□□□□ 0.58
Brca1P48754 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Brca1P48754 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Brca1P48754 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Brca1P48754 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.7■□□□□ 0.58
Brca1P48754 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Brca1P48754 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Brca1P48754 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Brca1P48754 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Brca1P48754 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Brca1P48754 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Brca1P48754 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.7■□□□□ 0.58
Brca1P48754 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.7■□□□□ 0.58
Brca1P48754 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Brca1P48754 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Brca1P48754 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Brca1P48754 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.7■□□□□ 0.58
Brca1P48754 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms