Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.86■□□□□ 0.45
HttP42859 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HttP42859 Mir7023-201ENSMUST00000185093 64 ntBASIC17.85■□□□□ 0.45
HttP42859 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.85■□□□□ 0.45
HttP42859 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HttP42859 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HttP42859 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
HttP42859 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HttP42859 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HttP42859 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HttP42859 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HttP42859 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HttP42859 Gm17968-201ENSMUST00000194902 784 ntBASIC17.85■□□□□ 0.45
HttP42859 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HttP42859 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.85■□□□□ 0.45
HttP42859 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HttP42859 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.85■□□□□ 0.45
HttP42859 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HttP42859 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.85■□□□□ 0.45
HttP42859 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.85■□□□□ 0.45
HttP42859 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.85■□□□□ 0.45
HttP42859 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.85■□□□□ 0.45
HttP42859 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HttP42859 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.85■□□□□ 0.45
HttP42859 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HttP42859 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HttP42859 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HttP42859 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HttP42859 Gm5312-201ENSMUST00000203728 547 ntBASIC17.84■□□□□ 0.45
HttP42859 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HttP42859 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HttP42859 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HttP42859 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HttP42859 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.84■□□□□ 0.45
HttP42859 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HttP42859 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HttP42859 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.84■□□□□ 0.45
HttP42859 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.84■□□□□ 0.45
HttP42859 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HttP42859 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HttP42859 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
HttP42859 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
HttP42859 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HttP42859 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HttP42859 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.83■□□□□ 0.45
HttP42859 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HttP42859 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.83■□□□□ 0.44
HttP42859 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HttP42859 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HttP42859 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HttP42859 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.83■□□□□ 0.44
HttP42859 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.83■□□□□ 0.44
HttP42859 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HttP42859 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HttP42859 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HttP42859 Gm7222-201ENSMUST00000117512 906 ntBASIC17.82■□□□□ 0.44
HttP42859 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.82■□□□□ 0.44
HttP42859 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
HttP42859 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HttP42859 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HttP42859 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HttP42859 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HttP42859 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HttP42859 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HttP42859 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HttP42859 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HttP42859 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HttP42859 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HttP42859 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HttP42859 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HttP42859 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
HttP42859 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HttP42859 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HttP42859 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HttP42859 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HttP42859 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HttP42859 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.81■□□□□ 0.44
HttP42859 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HttP42859 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HttP42859 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HttP42859 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HttP42859 Gm11424-201ENSMUST00000121929 829 ntBASIC17.81■□□□□ 0.44
HttP42859 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.81■□□□□ 0.44
HttP42859 Gm27494-201ENSMUST00000184735 189 ntBASIC17.81■□□□□ 0.44
HttP42859 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HttP42859 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HttP42859 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HttP42859 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HttP42859 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HttP42859 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HttP42859 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HttP42859 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HttP42859 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.8■□□□□ 0.44
HttP42859 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HttP42859 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HttP42859 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HttP42859 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.8■□□□□ 0.44
HttP42859 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HttP42859 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HttP42859 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms