Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LdlrP35951 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LdlrP35951 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
LdlrP35951 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.65■□□□□ 0.26
LdlrP35951 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LdlrP35951 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LdlrP35951 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LdlrP35951 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LdlrP35951 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LdlrP35951 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LdlrP35951 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LdlrP35951 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
LdlrP35951 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
LdlrP35951 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
LdlrP35951 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LdlrP35951 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LdlrP35951 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LdlrP35951 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LdlrP35951 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.64■□□□□ 0.25
LdlrP35951 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LdlrP35951 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LdlrP35951 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LdlrP35951 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LdlrP35951 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.64■□□□□ 0.25
LdlrP35951 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LdlrP35951 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LdlrP35951 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LdlrP35951 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LdlrP35951 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LdlrP35951 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LdlrP35951 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LdlrP35951 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LdlrP35951 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LdlrP35951 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
LdlrP35951 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LdlrP35951 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LdlrP35951 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LdlrP35951 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LdlrP35951 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LdlrP35951 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LdlrP35951 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LdlrP35951 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.63■□□□□ 0.25
LdlrP35951 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LdlrP35951 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LdlrP35951 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LdlrP35951 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LdlrP35951 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.63■□□□□ 0.25
LdlrP35951 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
LdlrP35951 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.63■□□□□ 0.25
LdlrP35951 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LdlrP35951 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LdlrP35951 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LdlrP35951 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LdlrP35951 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
LdlrP35951 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.63■□□□□ 0.25
LdlrP35951 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.63■□□□□ 0.25
LdlrP35951 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LdlrP35951 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LdlrP35951 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LdlrP35951 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LdlrP35951 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LdlrP35951 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LdlrP35951 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LdlrP35951 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LdlrP35951 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LdlrP35951 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LdlrP35951 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LdlrP35951 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LdlrP35951 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
LdlrP35951 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.62■□□□□ 0.25
LdlrP35951 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LdlrP35951 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
LdlrP35951 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
LdlrP35951 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.62■□□□□ 0.25
LdlrP35951 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LdlrP35951 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LdlrP35951 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LdlrP35951 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LdlrP35951 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LdlrP35951 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LdlrP35951 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LdlrP35951 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LdlrP35951 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LdlrP35951 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LdlrP35951 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LdlrP35951 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.62■□□□□ 0.25
LdlrP35951 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LdlrP35951 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LdlrP35951 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LdlrP35951 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LdlrP35951 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
LdlrP35951 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LdlrP35951 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LdlrP35951 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LdlrP35951 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LdlrP35951 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.61■□□□□ 0.25
LdlrP35951 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.61■□□□□ 0.25
LdlrP35951 Gm4974-201ENSMUST00000209974 875 ntBASIC16.61■□□□□ 0.25
LdlrP35951 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LdlrP35951 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms