Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccl6P27784 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccl6P27784 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccl6P27784 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccl6P27784 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccl6P27784 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.04□□□□□ -0.32
Ccl6P27784 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl6P27784 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl6P27784 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl6P27784 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl6P27784 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl6P27784 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl6P27784 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl6P27784 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ccl6P27784 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl6P27784 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl6P27784 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl6P27784 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl6P27784 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl6P27784 Gm17661-201ENSMUST00000170317 270 ntBASIC13.04□□□□□ -0.32
Ccl6P27784 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ccl6P27784 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl6P27784 Gm3375-201ENSMUST00000203929 796 ntBASIC13.04□□□□□ -0.32
Ccl6P27784 Gm9731-201ENSMUST00000209480 747 ntBASIC13.04□□□□□ -0.32
Ccl6P27784 Gm7791-201ENSMUST00000219066 539 ntBASIC13.04□□□□□ -0.32
Ccl6P27784 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl6P27784 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl6P27784 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.04□□□□□ -0.32
Ccl6P27784 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl6P27784 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl6P27784 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ccl6P27784 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl6P27784 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl6P27784 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl6P27784 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl6P27784 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl6P27784 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl6P27784 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ccl6P27784 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl6P27784 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl6P27784 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl6P27784 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl6P27784 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl6P27784 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl6P27784 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
Ccl6P27784 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl6P27784 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.03□□□□□ -0.32
Ccl6P27784 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl6P27784 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ccl6P27784 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl6P27784 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Ccl6P27784 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl6P27784 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.03□□□□□ -0.32
Ccl6P27784 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccl6P27784 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl6P27784 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl6P27784 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.03□□□□□ -0.32
Ccl6P27784 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl6P27784 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl6P27784 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl6P27784 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
Ccl6P27784 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccl6P27784 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ccl6P27784 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl6P27784 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccl6P27784 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccl6P27784 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccl6P27784 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccl6P27784 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccl6P27784 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccl6P27784 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccl6P27784 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccl6P27784 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Ccl6P27784 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccl6P27784 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccl6P27784 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.02□□□□□ -0.32
Ccl6P27784 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl6P27784 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl6P27784 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.02□□□□□ -0.33
Ccl6P27784 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl6P27784 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl6P27784 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl6P27784 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl6P27784 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccl6P27784 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl6P27784 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl6P27784 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccl6P27784 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl6P27784 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl6P27784 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl6P27784 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccl6P27784 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl6P27784 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl6P27784 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.02□□□□□ -0.33
Ccl6P27784 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl6P27784 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl6P27784 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.01□□□□□ -0.33
Ccl6P27784 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl6P27784 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl6P27784 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms