Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Gm11336-201ENSMUST00000118168 334 ntBASIC18.39■□□□□ 0.53
Msh3P13705 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Msh3P13705 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.39■□□□□ 0.53
Msh3P13705 Gm29707-201ENSMUST00000196325 491 ntBASIC18.39■□□□□ 0.53
Msh3P13705 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msh3P13705 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Msh3P13705 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msh3P13705 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msh3P13705 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msh3P13705 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msh3P13705 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msh3P13705 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Msh3P13705 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Msh3P13705 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh3P13705 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh3P13705 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh3P13705 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh3P13705 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Msh3P13705 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Msh3P13705 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Msh3P13705 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh3P13705 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh3P13705 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Msh3P13705 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Msh3P13705 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh3P13705 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh3P13705 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh3P13705 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Msh3P13705 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.38■□□□□ 0.53
Msh3P13705 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Msh3P13705 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Msh3P13705 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.38■□□□□ 0.53
Msh3P13705 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh3P13705 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.37■□□□□ 0.53
Msh3P13705 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.37■□□□□ 0.53
Msh3P13705 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh3P13705 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Msh3P13705 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh3P13705 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Msh3P13705 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh3P13705 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Msh3P13705 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh3P13705 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Msh3P13705 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.37■□□□□ 0.53
Msh3P13705 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Msh3P13705 Gm21559-201ENSMUST00000220638 855 ntBASIC18.37■□□□□ 0.53
Msh3P13705 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh3P13705 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh3P13705 Gm8587-201ENSMUST00000076538 843 ntBASIC18.37■□□□□ 0.53
Msh3P13705 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Msh3P13705 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh3P13705 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh3P13705 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh3P13705 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Msh3P13705 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Msh3P13705 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh3P13705 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh3P13705 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh3P13705 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh3P13705 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh3P13705 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Msh3P13705 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Msh3P13705 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh3P13705 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.36■□□□□ 0.53
Msh3P13705 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Msh3P13705 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Msh3P13705 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh3P13705 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Msh3P13705 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Msh3P13705 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Msh3P13705 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.36■□□□□ 0.53
Msh3P13705 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.35■□□□□ 0.53
Msh3P13705 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Msh3P13705 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh3P13705 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Msh3P13705 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh3P13705 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Msh3P13705 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Msh3P13705 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Msh3P13705 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Msh3P13705 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.35■□□□□ 0.53
Msh3P13705 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh3P13705 Gm9987-201ENSMUST00000069768 567 ntBASIC18.35■□□□□ 0.53
Msh3P13705 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh3P13705 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh3P13705 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Msh3P13705 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Msh3P13705 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.35■□□□□ 0.53
Msh3P13705 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh3P13705 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh3P13705 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.35■□□□□ 0.53
Msh3P13705 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh3P13705 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh3P13705 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh3P13705 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh3P13705 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh3P13705 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Msh3P13705 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Msh3P13705 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Msh3P13705 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms