Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ccl3P10855 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccl3P10855 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccl3P10855 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.76□□□□□ -0.05
Ccl3P10855 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.76□□□□□ -0.05
Ccl3P10855 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccl3P10855 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.76□□□□□ -0.05
Ccl3P10855 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.76□□□□□ -0.05
Ccl3P10855 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.76□□□□□ -0.05
Ccl3P10855 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.76□□□□□ -0.05
Ccl3P10855 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccl3P10855 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccl3P10855 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.76□□□□□ -0.05
Ccl3P10855 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccl3P10855 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Ccl3P10855 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccl3P10855 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccl3P10855 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccl3P10855 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ccl3P10855 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccl3P10855 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.76□□□□□ -0.05
Ccl3P10855 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl3P10855 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl3P10855 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl3P10855 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl3P10855 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl3P10855 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl3P10855 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.75□□□□□ -0.05
Ccl3P10855 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl3P10855 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.75□□□□□ -0.05
Ccl3P10855 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl3P10855 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl3P10855 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl3P10855 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.75□□□□□ -0.05
Ccl3P10855 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.75□□□□□ -0.05
Ccl3P10855 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl3P10855 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl3P10855 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl3P10855 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl3P10855 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl3P10855 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Ccl3P10855 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Ccl3P10855 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.75□□□□□ -0.05
Ccl3P10855 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl3P10855 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl3P10855 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl3P10855 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl3P10855 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl3P10855 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl3P10855 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl3P10855 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl3P10855 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl3P10855 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Ccl3P10855 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl3P10855 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl3P10855 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl3P10855 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl3P10855 Gm1401-201ENSMUST00000122048 772 ntBASIC14.74□□□□□ -0.05
Ccl3P10855 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl3P10855 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.74□□□□□ -0.05
Ccl3P10855 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl3P10855 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Ccl3P10855 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl3P10855 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ccl3P10855 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl3P10855 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl3P10855 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Ccl3P10855 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl3P10855 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl3P10855 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl3P10855 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Ccl3P10855 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl3P10855 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl3P10855 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Ccl3P10855 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl3P10855 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl3P10855 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl3P10855 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Ccl3P10855 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl3P10855 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl3P10855 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl3P10855 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.73□□□□□ -0.05
Ccl3P10855 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.73□□□□□ -0.05
Ccl3P10855 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl3P10855 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl3P10855 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl3P10855 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.73□□□□□ -0.05
Ccl3P10855 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.73□□□□□ -0.05
Ccl3P10855 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl3P10855 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Ccl3P10855 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.73□□□□□ -0.05
Ccl3P10855 Gm37935-201ENSMUST00000192012 982 ntBASIC14.73□□□□□ -0.05
Ccl3P10855 Gm10060-201ENSMUST00000212002 111 ntBASIC14.73□□□□□ -0.05
Ccl3P10855 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl3P10855 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.73□□□□□ -0.05
Ccl3P10855 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl3P10855 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl3P10855 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.73□□□□□ -0.05
Ccl3P10855 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl3P10855 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms