Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa3P02831 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.03□□□□□ -0.16
Hoxa3P02831 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.03□□□□□ -0.16
Hoxa3P02831 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa3P02831 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa3P02831 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa3P02831 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa3P02831 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.03□□□□□ -0.16
Hoxa3P02831 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa3P02831 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa3P02831 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa3P02831 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa3P02831 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxa3P02831 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxa3P02831 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxa3P02831 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxa3P02831 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxa3P02831 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxa3P02831 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxa3P02831 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxa3P02831 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxa3P02831 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxa3P02831 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.02□□□□□ -0.17
Hoxa3P02831 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.02□□□□□ -0.17
Hoxa3P02831 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxa3P02831 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxa3P02831 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxa3P02831 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxa3P02831 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxa3P02831 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxa3P02831 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxa3P02831 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxa3P02831 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa3P02831 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa3P02831 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.01□□□□□ -0.17
Hoxa3P02831 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa3P02831 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa3P02831 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hoxa3P02831 Actl10-202ENSMUST00000226583 1501 ntBASIC14.01□□□□□ -0.17
Hoxa3P02831 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa3P02831 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.01□□□□□ -0.17
Hoxa3P02831 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hoxa3P02831 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa3P02831 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa3P02831 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa3P02831 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa3P02831 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.01□□□□□ -0.17
Hoxa3P02831 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hoxa3P02831 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa3P02831 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hoxa3P02831 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa3P02831 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa3P02831 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hoxa3P02831 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa3P02831 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa3P02831 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.01□□□□□ -0.17
Hoxa3P02831 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa3P02831 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Hoxa3P02831 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa3P02831 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa3P02831 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Hoxa3P02831 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Hoxa3P02831 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa3P02831 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa3P02831 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa3P02831 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxa3P02831 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa3P02831 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14□□□□□ -0.17
Hoxa3P02831 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa3P02831 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa3P02831 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa3P02831 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14□□□□□ -0.17
Hoxa3P02831 Gm25016-201ENSMUST00000158399 131 ntBASIC14□□□□□ -0.17
Hoxa3P02831 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14□□□□□ -0.17
Hoxa3P02831 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14□□□□□ -0.17
Hoxa3P02831 Gm5587-201ENSMUST00000206270 674 ntBASIC14□□□□□ -0.17
Hoxa3P02831 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa3P02831 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxa3P02831 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa3P02831 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa3P02831 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxa3P02831 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa3P02831 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa3P02831 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14□□□□□ -0.17
Hoxa3P02831 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Hoxa3P02831 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa3P02831 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa3P02831 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.99□□□□□ -0.17
Hoxa3P02831 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxa3P02831 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxa3P02831 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxa3P02831 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxa3P02831 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Hoxa3P02831 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Hoxa3P02831 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Hoxa3P02831 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxa3P02831 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxa3P02831 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxa3P02831 Gm26039-201ENSMUST00000158152 144 ntBASIC13.99□□□□□ -0.17
Hoxa3P02831 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms