Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.07■□□□□ 0.16
Best1O88870 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.07■□□□□ 0.16
Best1O88870 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Best1O88870 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Best1O88870 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.07■□□□□ 0.16
Best1O88870 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Best1O88870 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.07■□□□□ 0.16
Best1O88870 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Best1O88870 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Best1O88870 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Best1O88870 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
Best1O88870 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Best1O88870 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Best1O88870 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Best1O88870 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Best1O88870 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Best1O88870 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Best1O88870 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Best1O88870 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Best1O88870 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.06■□□□□ 0.16
Best1O88870 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Best1O88870 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Best1O88870 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Best1O88870 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Best1O88870 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Best1O88870 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Best1O88870 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Best1O88870 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Best1O88870 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.05■□□□□ 0.16
Best1O88870 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Best1O88870 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Best1O88870 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Best1O88870 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Best1O88870 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Best1O88870 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Best1O88870 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Best1O88870 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Best1O88870 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Best1O88870 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Best1O88870 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Best1O88870 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Best1O88870 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Best1O88870 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.04■□□□□ 0.16
Best1O88870 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Best1O88870 Gm13312-201ENSMUST00000119631 718 ntBASIC16.04■□□□□ 0.16
Best1O88870 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Best1O88870 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Best1O88870 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.04■□□□□ 0.16
Best1O88870 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.04■□□□□ 0.16
Best1O88870 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.04■□□□□ 0.16
Best1O88870 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.04■□□□□ 0.16
Best1O88870 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.04■□□□□ 0.16
Best1O88870 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Best1O88870 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Best1O88870 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Best1O88870 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Best1O88870 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Best1O88870 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Best1O88870 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Best1O88870 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Best1O88870 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Best1O88870 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Best1O88870 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Best1O88870 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Best1O88870 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Best1O88870 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Best1O88870 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.03■□□□□ 0.16
Best1O88870 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Best1O88870 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Best1O88870 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Best1O88870 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Best1O88870 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Best1O88870 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Best1O88870 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Best1O88870 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Best1O88870 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Best1O88870 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Best1O88870 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Best1O88870 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Best1O88870 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.03■□□□□ 0.16
Best1O88870 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Best1O88870 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.02■□□□□ 0.16
Best1O88870 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Best1O88870 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Best1O88870 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Best1O88870 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Best1O88870 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Best1O88870 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Best1O88870 Gm15372-201ENSMUST00000120729 834 ntBASIC16.02■□□□□ 0.16
Best1O88870 Gm17971-201ENSMUST00000190239 806 ntBASIC16.02■□□□□ 0.16
Best1O88870 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Best1O88870 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Best1O88870 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.02■□□□□ 0.16
Best1O88870 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Best1O88870 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.02■□□□□ 0.16
Best1O88870 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Best1O88870 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Best1O88870 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.02■□□□□ 0.15
Best1O88870 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.15
Best1O88870 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms