Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
Cops6O88545 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cops6O88545 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cops6O88545 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cops6O88545 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cops6O88545 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cops6O88545 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cops6O88545 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cops6O88545 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cops6O88545 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Cops6O88545 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cops6O88545 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cops6O88545 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cops6O88545 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cops6O88545 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cops6O88545 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cops6O88545 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cops6O88545 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cops6O88545 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cops6O88545 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cops6O88545 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cops6O88545 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cops6O88545 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.38■□□□□ 0.85
Cops6O88545 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cops6O88545 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cops6O88545 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cops6O88545 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cops6O88545 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cops6O88545 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cops6O88545 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC20.38■□□□□ 0.85
Cops6O88545 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cops6O88545 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.38■□□□□ 0.85
Cops6O88545 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cops6O88545 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.37■□□□□ 0.85
Cops6O88545 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cops6O88545 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Cops6O88545 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cops6O88545 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cops6O88545 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cops6O88545 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cops6O88545 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cops6O88545 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cops6O88545 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cops6O88545 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Cops6O88545 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cops6O88545 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Cops6O88545 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cops6O88545 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cops6O88545 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Cops6O88545 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cops6O88545 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cops6O88545 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cops6O88545 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cops6O88545 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cops6O88545 Gm27867-201ENSMUST00000184778 125 ntBASIC20.36■□□□□ 0.85
Cops6O88545 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
Cops6O88545 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC20.36■□□□□ 0.85
Cops6O88545 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cops6O88545 Gm44454-201ENSMUST00000198541 138 ntBASIC20.36■□□□□ 0.85
Cops6O88545 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cops6O88545 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cops6O88545 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cops6O88545 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cops6O88545 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cops6O88545 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cops6O88545 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cops6O88545 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cops6O88545 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cops6O88545 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cops6O88545 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Cops6O88545 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cops6O88545 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cops6O88545 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Cops6O88545 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC20.35■□□□□ 0.85
Cops6O88545 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cops6O88545 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cops6O88545 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cops6O88545 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cops6O88545 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cops6O88545 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cops6O88545 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cops6O88545 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.34■□□□□ 0.85
Cops6O88545 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cops6O88545 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cops6O88545 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cops6O88545 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cops6O88545 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Cops6O88545 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Cops6O88545 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cops6O88545 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cops6O88545 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC20.34■□□□□ 0.85
Cops6O88545 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.34■□□□□ 0.85
Cops6O88545 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cops6O88545 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cops6O88545 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Cops6O88545 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Cops6O88545 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cops6O88545 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cops6O88545 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cops6O88545 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms