Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm10226O88253 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm10226O88253 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Gm10226O88253 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Gm10226O88253 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.9□□□□□ -0.34
Gm10226O88253 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm10226O88253 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm10226O88253 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm10226O88253 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Gm10226O88253 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Gm10226O88253 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Gm10226O88253 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm10226O88253 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm10226O88253 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Gm10226O88253 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm10226O88253 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.89□□□□□ -0.35
Gm10226O88253 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Gm10226O88253 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Gm10226O88253 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm10226O88253 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm10226O88253 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm10226O88253 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm10226O88253 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.89□□□□□ -0.35
Gm10226O88253 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm10226O88253 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Gm10226O88253 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm10226O88253 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.89□□□□□ -0.35
Gm10226O88253 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm10226O88253 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm10226O88253 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm10226O88253 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Gm10226O88253 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm10226O88253 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Gm10226O88253 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Gm10226O88253 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm10226O88253 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10226O88253 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10226O88253 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10226O88253 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10226O88253 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Gm10226O88253 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10226O88253 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10226O88253 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10226O88253 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Gm10226O88253 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.88□□□□□ -0.35
Gm10226O88253 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10226O88253 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.88□□□□□ -0.35
Gm10226O88253 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.88□□□□□ -0.35
Gm10226O88253 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Gm10226O88253 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10226O88253 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10226O88253 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10226O88253 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Gm10226O88253 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Gm10226O88253 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Gm10226O88253 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Gm10226O88253 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.88□□□□□ -0.35
Gm10226O88253 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.88□□□□□ -0.35
Gm10226O88253 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Gm10226O88253 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10226O88253 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10226O88253 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10226O88253 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10226O88253 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.88□□□□□ -0.35
Gm10226O88253 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10226O88253 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.87□□□□□ -0.35
Gm10226O88253 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10226O88253 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10226O88253 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10226O88253 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Gm10226O88253 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Gm10226O88253 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10226O88253 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10226O88253 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Gm10226O88253 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10226O88253 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.87□□□□□ -0.35
Gm10226O88253 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Gm10226O88253 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10226O88253 Gm27742-201ENSMUST00000184667 60 ntBASIC12.87□□□□□ -0.35
Gm10226O88253 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.87□□□□□ -0.35
Gm10226O88253 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10226O88253 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10226O88253 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10226O88253 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10226O88253 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10226O88253 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10226O88253 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10226O88253 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10226O88253 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10226O88253 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10226O88253 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10226O88253 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10226O88253 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm10226O88253 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm10226O88253 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Gm10226O88253 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm10226O88253 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm10226O88253 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm10226O88253 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Gm10226O88253 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms