Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Gm7370-201ENSMUST00000219471 767 ntBASIC12.47□□□□□ -0.41
Rpl35aO55142 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl35aO55142 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Rpl35aO55142 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Rpl35aO55142 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Rpl35aO55142 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl35aO55142 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.47□□□□□ -0.41
Rpl35aO55142 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rpl35aO55142 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl35aO55142 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.47□□□□□ -0.41
Rpl35aO55142 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Rpl35aO55142 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl35aO55142 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl35aO55142 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpl35aO55142 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.46□□□□□ -0.41
Rpl35aO55142 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpl35aO55142 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpl35aO55142 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rpl35aO55142 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpl35aO55142 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.46□□□□□ -0.41
Rpl35aO55142 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpl35aO55142 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpl35aO55142 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.46□□□□□ -0.41
Rpl35aO55142 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpl35aO55142 Gm45606-201ENSMUST00000209836 2795 ntBASIC12.46□□□□□ -0.41
Rpl35aO55142 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rpl35aO55142 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.46□□□□□ -0.41
Rpl35aO55142 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.46□□□□□ -0.41
Rpl35aO55142 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpl35aO55142 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rpl35aO55142 Gm7213-201ENSMUST00000215977 950 ntBASIC12.46□□□□□ -0.41
Rpl35aO55142 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Rpl35aO55142 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpl35aO55142 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Rpl35aO55142 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rpl35aO55142 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rpl35aO55142 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rpl35aO55142 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rpl35aO55142 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl35aO55142 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl35aO55142 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl35aO55142 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl35aO55142 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC12.45□□□□□ -0.42
Rpl35aO55142 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl35aO55142 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Rpl35aO55142 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl35aO55142 Gm10013-201ENSMUST00000106074 672 ntBASIC12.45□□□□□ -0.42
Rpl35aO55142 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.45□□□□□ -0.42
Rpl35aO55142 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl35aO55142 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl35aO55142 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl35aO55142 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rpl35aO55142 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Rpl35aO55142 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.45□□□□□ -0.42
Rpl35aO55142 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl35aO55142 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl35aO55142 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Rpl35aO55142 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl35aO55142 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl35aO55142 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl35aO55142 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl35aO55142 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl35aO55142 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl35aO55142 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl35aO55142 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl35aO55142 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl35aO55142 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.44□□□□□ -0.42
Rpl35aO55142 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl35aO55142 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl35aO55142 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl35aO55142 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.44□□□□□ -0.42
Rpl35aO55142 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.44□□□□□ -0.42
Rpl35aO55142 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl35aO55142 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl35aO55142 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl35aO55142 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl35aO55142 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.44□□□□□ -0.42
Rpl35aO55142 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rpl35aO55142 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Rpl35aO55142 Gm27389-201ENSMUST00000183622 195 ntBASIC12.44□□□□□ -0.42
Rpl35aO55142 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Rpl35aO55142 Ddx41-204ENSMUST00000224765 2199 ntBASIC12.44□□□□□ -0.42
Rpl35aO55142 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl35aO55142 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Rpl35aO55142 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.44□□□□□ -0.42
Rpl35aO55142 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl35aO55142 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl35aO55142 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rpl35aO55142 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl35aO55142 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rpl35aO55142 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl35aO55142 Gm37811-201ENSMUST00000192416 2601 ntBASIC12.43□□□□□ -0.42
Rpl35aO55142 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl35aO55142 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl35aO55142 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl35aO55142 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl35aO55142 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl35aO55142 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl35aO55142 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl35aO55142 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms