Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cntnap1O54991 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cntnap1O54991 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Cntnap1O54991 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cntnap1O54991 Gm43474-201ENSMUST00000196415 774 ntBASIC21.55■■□□□ 1.04
Cntnap1O54991 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cntnap1O54991 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cntnap1O54991 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cntnap1O54991 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Cntnap1O54991 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Cntnap1O54991 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cntnap1O54991 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cntnap1O54991 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cntnap1O54991 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
Cntnap1O54991 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cntnap1O54991 Gm11745-201ENSMUST00000121669 448 ntBASIC21.54■■□□□ 1.04
Cntnap1O54991 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC21.54■■□□□ 1.04
Cntnap1O54991 Gm22175-201ENSMUST00000175007 78 ntBASIC21.54■■□□□ 1.04
Cntnap1O54991 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cntnap1O54991 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC21.54■■□□□ 1.04
Cntnap1O54991 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC21.54■■□□□ 1.04
Cntnap1O54991 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC21.54■■□□□ 1.04
Cntnap1O54991 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cntnap1O54991 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cntnap1O54991 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.54■■□□□ 1.04
Cntnap1O54991 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cntnap1O54991 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cntnap1O54991 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cntnap1O54991 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Cntnap1O54991 Mir6990-201ENSMUST00000183724 91 ntBASIC21.53■■□□□ 1.04
Cntnap1O54991 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cntnap1O54991 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cntnap1O54991 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cntnap1O54991 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Cntnap1O54991 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cntnap1O54991 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cntnap1O54991 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cntnap1O54991 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC21.52■■□□□ 1.04
Cntnap1O54991 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cntnap1O54991 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC21.52■■□□□ 1.04
Cntnap1O54991 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC21.52■■□□□ 1.04
Cntnap1O54991 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cntnap1O54991 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cntnap1O54991 AC140397.2-201ENSMUST00000224213 834 ntBASIC21.52■■□□□ 1.04
Cntnap1O54991 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cntnap1O54991 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cntnap1O54991 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Cntnap1O54991 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cntnap1O54991 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cntnap1O54991 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cntnap1O54991 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cntnap1O54991 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC21.52■■□□□ 1.04
Cntnap1O54991 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cntnap1O54991 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cntnap1O54991 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cntnap1O54991 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Cntnap1O54991 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cntnap1O54991 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cntnap1O54991 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cntnap1O54991 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cntnap1O54991 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cntnap1O54991 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.51■■□□□ 1.03
Cntnap1O54991 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC21.51■■□□□ 1.03
Cntnap1O54991 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cntnap1O54991 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC21.51■■□□□ 1.03
Cntnap1O54991 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC21.51■■□□□ 1.03
Cntnap1O54991 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC21.51■■□□□ 1.03
Cntnap1O54991 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC21.51■■□□□ 1.03
Cntnap1O54991 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC21.51■■□□□ 1.03
Cntnap1O54991 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cntnap1O54991 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Cntnap1O54991 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cntnap1O54991 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cntnap1O54991 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cntnap1O54991 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cntnap1O54991 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cntnap1O54991 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cntnap1O54991 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cntnap1O54991 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Cntnap1O54991 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cntnap1O54991 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC21.5■■□□□ 1.03
Cntnap1O54991 Gm15427-201ENSMUST00000117288 531 ntBASIC21.5■■□□□ 1.03
Cntnap1O54991 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC21.5■■□□□ 1.03
Cntnap1O54991 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.5■■□□□ 1.03
Cntnap1O54991 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cntnap1O54991 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cntnap1O54991 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Cntnap1O54991 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cntnap1O54991 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cntnap1O54991 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cntnap1O54991 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Cntnap1O54991 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Cntnap1O54991 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cntnap1O54991 Gm2308-201ENSMUST00000166539 1004 ntBASIC21.49■■□□□ 1.03
Cntnap1O54991 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC21.49■■□□□ 1.03
Cntnap1O54991 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cntnap1O54991 Nrn1-204ENSMUST00000224323 1779 ntBASIC21.49■■□□□ 1.03
Cntnap1O54991 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cntnap1O54991 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Cntnap1O54991 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms