Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sptlc1O35704 Gm5864-201ENSMUST00000202263 970 ntBASIC18.27■□□□□ 0.52
Sptlc1O35704 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sptlc1O35704 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sptlc1O35704 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sptlc1O35704 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sptlc1O35704 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sptlc1O35704 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sptlc1O35704 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sptlc1O35704 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sptlc1O35704 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sptlc1O35704 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sptlc1O35704 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sptlc1O35704 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Sptlc1O35704 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sptlc1O35704 Gm15372-201ENSMUST00000120729 834 ntBASIC18.26■□□□□ 0.51
Sptlc1O35704 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.26■□□□□ 0.51
Sptlc1O35704 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.26■□□□□ 0.51
Sptlc1O35704 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sptlc1O35704 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sptlc1O35704 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sptlc1O35704 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.26■□□□□ 0.51
Sptlc1O35704 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sptlc1O35704 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Sptlc1O35704 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sptlc1O35704 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sptlc1O35704 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sptlc1O35704 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sptlc1O35704 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sptlc1O35704 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.25■□□□□ 0.51
Sptlc1O35704 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.25■□□□□ 0.51
Sptlc1O35704 Gm28659-201ENSMUST00000188013 759 ntBASIC18.25■□□□□ 0.51
Sptlc1O35704 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sptlc1O35704 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sptlc1O35704 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sptlc1O35704 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sptlc1O35704 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sptlc1O35704 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sptlc1O35704 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sptlc1O35704 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sptlc1O35704 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sptlc1O35704 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sptlc1O35704 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.24■□□□□ 0.51
Sptlc1O35704 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sptlc1O35704 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sptlc1O35704 Gm13884-201ENSMUST00000118103 829 ntBASIC18.24■□□□□ 0.51
Sptlc1O35704 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.24■□□□□ 0.51
Sptlc1O35704 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.24■□□□□ 0.51
Sptlc1O35704 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.24■□□□□ 0.51
Sptlc1O35704 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Sptlc1O35704 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sptlc1O35704 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.24■□□□□ 0.51
Sptlc1O35704 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sptlc1O35704 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Sptlc1O35704 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sptlc1O35704 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sptlc1O35704 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sptlc1O35704 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sptlc1O35704 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sptlc1O35704 Rarb-207ENSMUST00000225921 2756 ntBASIC18.24■□□□□ 0.51
Sptlc1O35704 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Sptlc1O35704 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sptlc1O35704 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sptlc1O35704 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sptlc1O35704 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Sptlc1O35704 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sptlc1O35704 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sptlc1O35704 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sptlc1O35704 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sptlc1O35704 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.23■□□□□ 0.51
Sptlc1O35704 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sptlc1O35704 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sptlc1O35704 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sptlc1O35704 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sptlc1O35704 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.23■□□□□ 0.51
Sptlc1O35704 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sptlc1O35704 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sptlc1O35704 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sptlc1O35704 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sptlc1O35704 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.23■□□□□ 0.51
Sptlc1O35704 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Sptlc1O35704 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sptlc1O35704 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sptlc1O35704 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sptlc1O35704 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.23■□□□□ 0.51
Sptlc1O35704 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sptlc1O35704 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sptlc1O35704 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Sptlc1O35704 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Sptlc1O35704 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sptlc1O35704 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sptlc1O35704 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Sptlc1O35704 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sptlc1O35704 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Sptlc1O35704 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sptlc1O35704 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sptlc1O35704 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Sptlc1O35704 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sptlc1O35704 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.22■□□□□ 0.51
Sptlc1O35704 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms