Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.18■□□□□ 0.5
Clk2O35491 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clk2O35491 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clk2O35491 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Clk2O35491 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clk2O35491 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clk2O35491 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clk2O35491 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clk2O35491 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Clk2O35491 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clk2O35491 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clk2O35491 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clk2O35491 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clk2O35491 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.17■□□□□ 0.5
Clk2O35491 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.17■□□□□ 0.5
Clk2O35491 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.17■□□□□ 0.5
Clk2O35491 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clk2O35491 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Clk2O35491 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.17■□□□□ 0.5
Clk2O35491 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clk2O35491 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clk2O35491 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clk2O35491 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clk2O35491 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clk2O35491 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clk2O35491 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clk2O35491 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clk2O35491 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clk2O35491 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clk2O35491 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clk2O35491 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clk2O35491 Gm27741-201ENSMUST00000185060 237 ntBASIC18.16■□□□□ 0.5
Clk2O35491 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Clk2O35491 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clk2O35491 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clk2O35491 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clk2O35491 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clk2O35491 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clk2O35491 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clk2O35491 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clk2O35491 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Clk2O35491 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.15■□□□□ 0.5
Clk2O35491 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Clk2O35491 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.15■□□□□ 0.5
Clk2O35491 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clk2O35491 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.15■□□□□ 0.5
Clk2O35491 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.15■□□□□ 0.5
Clk2O35491 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Clk2O35491 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.15■□□□□ 0.5
Clk2O35491 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clk2O35491 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.15■□□□□ 0.5
Clk2O35491 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clk2O35491 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Clk2O35491 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clk2O35491 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clk2O35491 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Clk2O35491 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Clk2O35491 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Clk2O35491 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Clk2O35491 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Clk2O35491 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Clk2O35491 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clk2O35491 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Clk2O35491 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.14■□□□□ 0.49
Clk2O35491 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.14■□□□□ 0.49
Clk2O35491 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Clk2O35491 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clk2O35491 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clk2O35491 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Clk2O35491 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clk2O35491 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clk2O35491 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Clk2O35491 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Clk2O35491 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clk2O35491 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
Clk2O35491 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clk2O35491 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Clk2O35491 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Clk2O35491 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.13■□□□□ 0.49
Clk2O35491 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Clk2O35491 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clk2O35491 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clk2O35491 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clk2O35491 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.13■□□□□ 0.49
Clk2O35491 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Clk2O35491 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Clk2O35491 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Clk2O35491 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clk2O35491 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clk2O35491 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clk2O35491 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clk2O35491 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Clk2O35491 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Clk2O35491 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Clk2O35491 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clk2O35491 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.12■□□□□ 0.49
Clk2O35491 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Clk2O35491 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clk2O35491 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clk2O35491 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms