Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Usp35M0QWN7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.94■□□□□ 0.46
Usp35M0QWN7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp35M0QWN7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp35M0QWN7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp35M0QWN7 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp35M0QWN7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp35M0QWN7 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.93■□□□□ 0.46
Usp35M0QWN7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Usp35M0QWN7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp35M0QWN7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp35M0QWN7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp35M0QWN7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.93■□□□□ 0.46
Usp35M0QWN7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp35M0QWN7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp35M0QWN7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp35M0QWN7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp35M0QWN7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp35M0QWN7 Gm9013-201ENSMUST00000132939 882 ntBASIC17.93■□□□□ 0.46
Usp35M0QWN7 Gm17661-201ENSMUST00000170317 270 ntBASIC17.93■□□□□ 0.46
Usp35M0QWN7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.93■□□□□ 0.46
Usp35M0QWN7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.93■□□□□ 0.46
Usp35M0QWN7 Gm5587-201ENSMUST00000206270 674 ntBASIC17.93■□□□□ 0.46
Usp35M0QWN7 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp35M0QWN7 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp35M0QWN7 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp35M0QWN7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp35M0QWN7 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp35M0QWN7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Usp35M0QWN7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp35M0QWN7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp35M0QWN7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp35M0QWN7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Usp35M0QWN7 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Usp35M0QWN7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp35M0QWN7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Usp35M0QWN7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp35M0QWN7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.92■□□□□ 0.46
Usp35M0QWN7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.92■□□□□ 0.46
Usp35M0QWN7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp35M0QWN7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp35M0QWN7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp35M0QWN7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Usp35M0QWN7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp35M0QWN7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Usp35M0QWN7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp35M0QWN7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp35M0QWN7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp35M0QWN7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp35M0QWN7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp35M0QWN7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.91■□□□□ 0.46
Usp35M0QWN7 Gm7284-201ENSMUST00000131667 944 ntBASIC17.91■□□□□ 0.46
Usp35M0QWN7 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp35M0QWN7 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp35M0QWN7 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.91■□□□□ 0.46
Usp35M0QWN7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp35M0QWN7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp35M0QWN7 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp35M0QWN7 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp35M0QWN7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.91■□□□□ 0.46
Usp35M0QWN7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp35M0QWN7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp35M0QWN7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp35M0QWN7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp35M0QWN7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp35M0QWN7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp35M0QWN7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp35M0QWN7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp35M0QWN7 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.9■□□□□ 0.46
Usp35M0QWN7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp35M0QWN7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.9■□□□□ 0.46
Usp35M0QWN7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp35M0QWN7 Ank2-226ENSMUST00000189368 339 ntBASIC17.9■□□□□ 0.46
Usp35M0QWN7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.9■□□□□ 0.46
Usp35M0QWN7 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp35M0QWN7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp35M0QWN7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp35M0QWN7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Usp35M0QWN7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp35M0QWN7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Usp35M0QWN7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.89■□□□□ 0.46
Usp35M0QWN7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Usp35M0QWN7 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Usp35M0QWN7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Usp35M0QWN7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Usp35M0QWN7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp35M0QWN7 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp35M0QWN7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp35M0QWN7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp35M0QWN7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp35M0QWN7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp35M0QWN7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp35M0QWN7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp35M0QWN7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.89■□□□□ 0.45
Usp35M0QWN7 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp35M0QWN7 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp35M0QWN7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp35M0QWN7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Usp35M0QWN7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp35M0QWN7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms