Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC30.39■■■□□ 2.46
Ccdc180J3QNE4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC30.39■■■□□ 2.46
Ccdc180J3QNE4 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Ccdc180J3QNE4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Ccdc180J3QNE4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Ccdc180J3QNE4 Gm5898-201ENSMUST00000121016 2071 ntBASIC30.39■■■□□ 2.46
Ccdc180J3QNE4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Ccdc180J3QNE4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.45
Ccdc180J3QNE4 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC30.39■■■□□ 2.45
Ccdc180J3QNE4 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.45
Ccdc180J3QNE4 Psmb5-202ENSMUST00000227257 622 ntBASIC30.39■■■□□ 2.45
Ccdc180J3QNE4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC30.39■■■□□ 2.45
Ccdc180J3QNE4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
Ccdc180J3QNE4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
Ccdc180J3QNE4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC30.38■■■□□ 2.45
Ccdc180J3QNE4 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
Ccdc180J3QNE4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC30.38■■■□□ 2.45
Ccdc180J3QNE4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Ccdc180J3QNE4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Ccdc180J3QNE4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Ccdc180J3QNE4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Ccdc180J3QNE4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Ccdc180J3QNE4 Gm13036-201ENSMUST00000117799 748 ntBASIC30.38■■■□□ 2.45
Ccdc180J3QNE4 Gm4459-201ENSMUST00000118750 468 ntBASIC30.38■■■□□ 2.45
Ccdc180J3QNE4 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC30.38■■■□□ 2.45
Ccdc180J3QNE4 AC127349.1-201ENSMUST00000224590 266 ntBASIC30.38■■■□□ 2.45
Ccdc180J3QNE4 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Ccdc180J3QNE4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
Ccdc180J3QNE4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Ccdc180J3QNE4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Ccdc180J3QNE4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Ccdc180J3QNE4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Ccdc180J3QNE4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Ccdc180J3QNE4 Gm6550-201ENSMUST00000187574 993 ntBASIC30.37■■■□□ 2.45
Ccdc180J3QNE4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Ccdc180J3QNE4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC30.37■■■□□ 2.45
Ccdc180J3QNE4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
Ccdc180J3QNE4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Ccdc180J3QNE4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Ccdc180J3QNE4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC30.37■■■□□ 2.45
Ccdc180J3QNE4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC30.37■■■□□ 2.45
Ccdc180J3QNE4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc180J3QNE4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc180J3QNE4 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc180J3QNE4 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc180J3QNE4 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
Ccdc180J3QNE4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc180J3QNE4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC30.36■■■□□ 2.45
Ccdc180J3QNE4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc180J3QNE4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC30.36■■■□□ 2.45
Ccdc180J3QNE4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
Ccdc180J3QNE4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC30.36■■■□□ 2.45
Ccdc180J3QNE4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc180J3QNE4 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc180J3QNE4 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC30.36■■■□□ 2.45
Ccdc180J3QNE4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Ccdc180J3QNE4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Ccdc180J3QNE4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Ccdc180J3QNE4 Gm8097-201ENSMUST00000117903 829 ntBASIC30.35■■■□□ 2.45
Ccdc180J3QNE4 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Ccdc180J3QNE4 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC30.35■■■□□ 2.45
Ccdc180J3QNE4 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC30.35■■■□□ 2.45
Ccdc180J3QNE4 Gm5364-201ENSMUST00000216789 889 ntBASIC30.35■■■□□ 2.45
Ccdc180J3QNE4 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Ccdc180J3QNE4 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Ccdc180J3QNE4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Ccdc180J3QNE4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Ccdc180J3QNE4 Gm9889-202ENSMUST00000206983 1577 ntBASIC30.34■■■□□ 2.45
Ccdc180J3QNE4 Gm37519-201ENSMUST00000191687 2210 ntBASIC30.34■■■□□ 2.45
Ccdc180J3QNE4 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC30.34■■■□□ 2.45
Ccdc180J3QNE4 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Ccdc180J3QNE4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC30.34■■■□□ 2.45
Ccdc180J3QNE4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC30.34■■■□□ 2.45
Ccdc180J3QNE4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC30.34■■■□□ 2.45
Ccdc180J3QNE4 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
Ccdc180J3QNE4 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC30.33■■■□□ 2.45
Ccdc180J3QNE4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
Ccdc180J3QNE4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Ccdc180J3QNE4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC30.33■■■□□ 2.45
Ccdc180J3QNE4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Ccdc180J3QNE4 Gm36967-201ENSMUST00000193814 266 ntBASIC30.33■■■□□ 2.45
Ccdc180J3QNE4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
Ccdc180J3QNE4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
Ccdc180J3QNE4 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ccdc180J3QNE4 Gm6598-201ENSMUST00000202719 2615 ntBASIC30.32■■■□□ 2.44
Ccdc180J3QNE4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ccdc180J3QNE4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Ccdc180J3QNE4 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC30.32■■■□□ 2.44
Ccdc180J3QNE4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ccdc180J3QNE4 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ccdc180J3QNE4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Ccdc180J3QNE4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ccdc180J3QNE4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
Ccdc180J3QNE4 Gm14140-201ENSMUST00000119999 995 ntBASIC30.31■■■□□ 2.44
Ccdc180J3QNE4 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC30.31■■■□□ 2.44
Ccdc180J3QNE4 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Ccdc180J3QNE4 Gm42670-201ENSMUST00000201816 1292 ntBASIC30.31■■■□□ 2.44
Ccdc180J3QNE4 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Ccdc180J3QNE4 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Ccdc180J3QNE4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms