Protein–RNA interactions for Protein: J3QMQ6

Gm3336, Predicted gene 3336, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3336J3QMQ6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3336J3QMQ6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3336J3QMQ6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3336J3QMQ6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Gm3336J3QMQ6 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3336J3QMQ6 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3336J3QMQ6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3336J3QMQ6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.21■□□□□ 0.35
Gm3336J3QMQ6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.21■□□□□ 0.35
Gm3336J3QMQ6 Gm6623-201ENSMUST00000173570 544 ntBASIC17.21■□□□□ 0.35
Gm3336J3QMQ6 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3336J3QMQ6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3336J3QMQ6 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3336J3QMQ6 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Gm3336J3QMQ6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3336J3QMQ6 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3336J3QMQ6 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.21■□□□□ 0.34
Gm3336J3QMQ6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.2■□□□□ 0.34
Gm3336J3QMQ6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3336J3QMQ6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3336J3QMQ6 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3336J3QMQ6 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3336J3QMQ6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3336J3QMQ6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3336J3QMQ6 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3336J3QMQ6 Gm33142-201ENSMUST00000193913 867 ntBASIC17.2■□□□□ 0.34
Gm3336J3QMQ6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3336J3QMQ6 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Gm3336J3QMQ6 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.2■□□□□ 0.34
Gm3336J3QMQ6 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3336J3QMQ6 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.2■□□□□ 0.34
Gm3336J3QMQ6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Gm3336J3QMQ6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3336J3QMQ6 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3336J3QMQ6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3336J3QMQ6 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3336J3QMQ6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3336J3QMQ6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Gm3336J3QMQ6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Gm3336J3QMQ6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm3336J3QMQ6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.19■□□□□ 0.34
Gm3336J3QMQ6 Gm11950-201ENSMUST00000121615 838 ntBASIC17.19■□□□□ 0.34
Gm3336J3QMQ6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.19■□□□□ 0.34
Gm3336J3QMQ6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.19■□□□□ 0.34
Gm3336J3QMQ6 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Gm3336J3QMQ6 Gm29707-201ENSMUST00000196325 491 ntBASIC17.19■□□□□ 0.34
Gm3336J3QMQ6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.19■□□□□ 0.34
Gm3336J3QMQ6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Gm3336J3QMQ6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm3336J3QMQ6 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.19■□□□□ 0.34
Gm3336J3QMQ6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm3336J3QMQ6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm3336J3QMQ6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Gm3336J3QMQ6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm3336J3QMQ6 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Gm3336J3QMQ6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm3336J3QMQ6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm3336J3QMQ6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm3336J3QMQ6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3336J3QMQ6 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3336J3QMQ6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3336J3QMQ6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3336J3QMQ6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3336J3QMQ6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3336J3QMQ6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3336J3QMQ6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3336J3QMQ6 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Gm3336J3QMQ6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3336J3QMQ6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3336J3QMQ6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3336J3QMQ6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3336J3QMQ6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3336J3QMQ6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3336J3QMQ6 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3336J3QMQ6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3336J3QMQ6 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.18■□□□□ 0.34
Gm3336J3QMQ6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Gm3336J3QMQ6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3336J3QMQ6 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3336J3QMQ6 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3336J3QMQ6 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3336J3QMQ6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.17■□□□□ 0.34
Gm3336J3QMQ6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3336J3QMQ6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3336J3QMQ6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3336J3QMQ6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Gm3336J3QMQ6 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3336J3QMQ6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3336J3QMQ6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3336J3QMQ6 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3336J3QMQ6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.17■□□□□ 0.34
Gm3336J3QMQ6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Gm3336J3QMQ6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3336J3QMQ6 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3336J3QMQ6 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3336J3QMQ6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3336J3QMQ6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3336J3QMQ6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.17■□□□□ 0.34
Gm3336J3QMQ6 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3336J3QMQ6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms