Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.94□□□□□ -0.02
Shank1D3YZU1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shank1D3YZU1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shank1D3YZU1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shank1D3YZU1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shank1D3YZU1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Shank1D3YZU1 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Shank1D3YZU1 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Shank1D3YZU1 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Shank1D3YZU1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shank1D3YZU1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shank1D3YZU1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shank1D3YZU1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Shank1D3YZU1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.94□□□□□ -0.02
Shank1D3YZU1 Gm44450-201ENSMUST00000199528 114 ntBASIC14.94□□□□□ -0.02
Shank1D3YZU1 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shank1D3YZU1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shank1D3YZU1 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.94□□□□□ -0.02
Shank1D3YZU1 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shank1D3YZU1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shank1D3YZU1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shank1D3YZU1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shank1D3YZU1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.93□□□□□ -0.02
Shank1D3YZU1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Shank1D3YZU1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.93□□□□□ -0.02
Shank1D3YZU1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Shank1D3YZU1 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.93□□□□□ -0.02
Shank1D3YZU1 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shank1D3YZU1 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shank1D3YZU1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shank1D3YZU1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Shank1D3YZU1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Shank1D3YZU1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shank1D3YZU1 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.93□□□□□ -0.02
Shank1D3YZU1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shank1D3YZU1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shank1D3YZU1 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Shank1D3YZU1 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.92□□□□□ -0.02
Shank1D3YZU1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Shank1D3YZU1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shank1D3YZU1 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shank1D3YZU1 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Shank1D3YZU1 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Shank1D3YZU1 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shank1D3YZU1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shank1D3YZU1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shank1D3YZU1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shank1D3YZU1 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shank1D3YZU1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.92□□□□□ -0.02
Shank1D3YZU1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shank1D3YZU1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shank1D3YZU1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shank1D3YZU1 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.92□□□□□ -0.02
Shank1D3YZU1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.92□□□□□ -0.02
Shank1D3YZU1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Shank1D3YZU1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shank1D3YZU1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shank1D3YZU1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shank1D3YZU1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Shank1D3YZU1 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Shank1D3YZU1 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shank1D3YZU1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shank1D3YZU1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.91□□□□□ -0.02
Shank1D3YZU1 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Shank1D3YZU1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Shank1D3YZU1 Psmb5-202ENSMUST00000227257 622 ntBASIC14.91□□□□□ -0.02
Shank1D3YZU1 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shank1D3YZU1 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shank1D3YZU1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Shank1D3YZU1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.91□□□□□ -0.02
Shank1D3YZU1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shank1D3YZU1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Shank1D3YZU1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shank1D3YZU1 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shank1D3YZU1 Gm15467-201ENSMUST00000120582 445 ntBASIC14.91□□□□□ -0.02
Shank1D3YZU1 Gm7862-201ENSMUST00000121461 292 ntBASIC14.91□□□□□ -0.02
Shank1D3YZU1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Shank1D3YZU1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.91□□□□□ -0.02
Shank1D3YZU1 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shank1D3YZU1 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shank1D3YZU1 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shank1D3YZU1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Shank1D3YZU1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Shank1D3YZU1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Shank1D3YZU1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shank1D3YZU1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shank1D3YZU1 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shank1D3YZU1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.9□□□□□ -0.02
Shank1D3YZU1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Shank1D3YZU1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.9□□□□□ -0.02
Shank1D3YZU1 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.9□□□□□ -0.02
Shank1D3YZU1 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Shank1D3YZU1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shank1D3YZU1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shank1D3YZU1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shank1D3YZU1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.9□□□□□ -0.02
Shank1D3YZU1 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shank1D3YZU1 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Shank1D3YZU1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shank1D3YZU1 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms