Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.74□□□□□ -0.21
Trav23A0A0G2JG17 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav23A0A0G2JG17 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav23A0A0G2JG17 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.74□□□□□ -0.21
Trav23A0A0G2JG17 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav23A0A0G2JG17 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Trav23A0A0G2JG17 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.74□□□□□ -0.21
Trav23A0A0G2JG17 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav23A0A0G2JG17 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav23A0A0G2JG17 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Trav23A0A0G2JG17 Gm13559-201ENSMUST00000120476 863 ntBASIC13.74□□□□□ -0.21
Trav23A0A0G2JG17 Gm13836-201ENSMUST00000121159 501 ntBASIC13.74□□□□□ -0.21
Trav23A0A0G2JG17 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.74□□□□□ -0.21
Trav23A0A0G2JG17 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.74□□□□□ -0.21
Trav23A0A0G2JG17 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.74□□□□□ -0.21
Trav23A0A0G2JG17 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav23A0A0G2JG17 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Trav23A0A0G2JG17 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav23A0A0G2JG17 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav23A0A0G2JG17 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav23A0A0G2JG17 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav23A0A0G2JG17 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Gm9731-201ENSMUST00000209480 747 ntBASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Gm7791-201ENSMUST00000219066 539 ntBASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav23A0A0G2JG17 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 Gm6433-201ENSMUST00000118634 875 ntBASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav23A0A0G2JG17 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav23A0A0G2JG17 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav23A0A0G2JG17 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav23A0A0G2JG17 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav23A0A0G2JG17 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav23A0A0G2JG17 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav23A0A0G2JG17 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav23A0A0G2JG17 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav23A0A0G2JG17 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trav23A0A0G2JG17 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Trav23A0A0G2JG17 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trav23A0A0G2JG17 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav23A0A0G2JG17 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav23A0A0G2JG17 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav23A0A0G2JG17 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav23A0A0G2JG17 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav23A0A0G2JG17 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav23A0A0G2JG17 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav23A0A0G2JG17 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms