Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atg4a-psA0A0G2JFS9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atg4a-psA0A0G2JFS9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atg4a-psA0A0G2JFS9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC20.33■□□□□ 0.85
Atg4a-psA0A0G2JFS9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atg4a-psA0A0G2JFS9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atg4a-psA0A0G2JFS9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Atg4a-psA0A0G2JFS9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atg4a-psA0A0G2JFS9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atg4a-psA0A0G2JFS9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC20.33■□□□□ 0.85
Atg4a-psA0A0G2JFS9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atg4a-psA0A0G2JFS9 Gm11336-201ENSMUST00000118168 334 ntBASIC20.33■□□□□ 0.85
Atg4a-psA0A0G2JFS9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Atg4a-psA0A0G2JFS9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Atg4a-psA0A0G2JFS9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atg4a-psA0A0G2JFS9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.33■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Atg4a-psA0A0G2JFS9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.33■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atg4a-psA0A0G2JFS9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Atg4a-psA0A0G2JFS9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC20.32■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.32■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Gm18421-201ENSMUST00000204122 625 ntBASIC20.32■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atg4a-psA0A0G2JFS9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.32■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Atg4a-psA0A0G2JFS9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Mir7071-201ENSMUST00000184847 69 ntBASIC20.31■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.3■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.3■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.3■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC20.3■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Gm20628-201ENSMUST00000177363 3215 ntBASIC20.3■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Atg4a-psA0A0G2JFS9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Atg4a-psA0A0G2JFS9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.29■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.29■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms