Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-4A0A0B4J1K2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-4A0A0B4J1K2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-4A0A0B4J1K2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-4A0A0B4J1K2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-4A0A0B4J1K2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-4A0A0B4J1K2 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.57□□□□□ -0.4
Trav9-4A0A0B4J1K2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-4A0A0B4J1K2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-4A0A0B4J1K2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav9-4A0A0B4J1K2 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gm45058-201ENSMUST00000205810 766 ntBASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-4A0A0B4J1K2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gm7213-201ENSMUST00000215977 950 ntBASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-4A0A0B4J1K2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-4A0A0B4J1K2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-4A0A0B4J1K2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav9-4A0A0B4J1K2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-4A0A0B4J1K2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-4A0A0B4J1K2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-4A0A0B4J1K2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-4A0A0B4J1K2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav9-4A0A0B4J1K2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-4A0A0B4J1K2 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-4A0A0B4J1K2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.54□□□□□ -0.4
Trav9-4A0A0B4J1K2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-4A0A0B4J1K2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.54□□□□□ -0.4
Trav9-4A0A0B4J1K2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-4A0A0B4J1K2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-4A0A0B4J1K2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-4A0A0B4J1K2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav9-4A0A0B4J1K2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-4A0A0B4J1K2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-4A0A0B4J1K2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms