Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv23A0A0A6YWQ1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv23A0A0A6YWQ1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv23A0A0A6YWQ1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv23A0A0A6YWQ1 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trbv23A0A0A6YWQ1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv23A0A0A6YWQ1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv23A0A0A6YWQ1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trbv23A0A0A6YWQ1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv23A0A0A6YWQ1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv23A0A0A6YWQ1 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trbv23A0A0A6YWQ1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Trbv23A0A0A6YWQ1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.42□□□□□ -0.1
Trbv23A0A0A6YWQ1 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv23A0A0A6YWQ1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Trbv23A0A0A6YWQ1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv23A0A0A6YWQ1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv23A0A0A6YWQ1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.41□□□□□ -0.1
Trbv23A0A0A6YWQ1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.41□□□□□ -0.1
Trbv23A0A0A6YWQ1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trbv23A0A0A6YWQ1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv23A0A0A6YWQ1 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv23A0A0A6YWQ1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv23A0A0A6YWQ1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv23A0A0A6YWQ1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv23A0A0A6YWQ1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv23A0A0A6YWQ1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv23A0A0A6YWQ1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv23A0A0A6YWQ1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv23A0A0A6YWQ1 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv23A0A0A6YWQ1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv23A0A0A6YWQ1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv23A0A0A6YWQ1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv23A0A0A6YWQ1 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trbv23A0A0A6YWQ1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv23A0A0A6YWQ1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trbv23A0A0A6YWQ1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv23A0A0A6YWQ1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trbv23A0A0A6YWQ1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trbv23A0A0A6YWQ1 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv23A0A0A6YWQ1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv23A0A0A6YWQ1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv23A0A0A6YWQ1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv23A0A0A6YWQ1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv23A0A0A6YWQ1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv23A0A0A6YWQ1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.4□□□□□ -0.1
Trbv23A0A0A6YWQ1 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv23A0A0A6YWQ1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv23A0A0A6YWQ1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv23A0A0A6YWQ1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.4□□□□□ -0.1
Trbv23A0A0A6YWQ1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv23A0A0A6YWQ1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv23A0A0A6YWQ1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv23A0A0A6YWQ1 Mtag2-201ENSMUST00000058665 714 ntBASIC14.4□□□□□ -0.1
Trbv23A0A0A6YWQ1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trbv23A0A0A6YWQ1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv23A0A0A6YWQ1 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv23A0A0A6YWQ1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv23A0A0A6YWQ1 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv23A0A0A6YWQ1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trbv23A0A0A6YWQ1 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv23A0A0A6YWQ1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv23A0A0A6YWQ1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trbv23A0A0A6YWQ1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv23A0A0A6YWQ1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv23A0A0A6YWQ1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv23A0A0A6YWQ1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv23A0A0A6YWQ1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv23A0A0A6YWQ1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv23A0A0A6YWQ1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv23A0A0A6YWQ1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv23A0A0A6YWQ1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv23A0A0A6YWQ1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv23A0A0A6YWQ1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv23A0A0A6YWQ1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv23A0A0A6YWQ1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv23A0A0A6YWQ1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv23A0A0A6YWQ1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv23A0A0A6YWQ1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv23A0A0A6YWQ1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv23A0A0A6YWQ1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Trbv23A0A0A6YWQ1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Trbv23A0A0A6YWQ1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trbv23A0A0A6YWQ1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.39□□□□□ -0.11
Trbv23A0A0A6YWQ1 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv23A0A0A6YWQ1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv23A0A0A6YWQ1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms