Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav18A0A075B656 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav18A0A075B656 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav18A0A075B656 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Gm12085-201ENSMUST00000119263 940 ntBASIC13.72□□□□□ -0.21
Trav18A0A075B656 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav18A0A075B656 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.72□□□□□ -0.21
Trav18A0A075B656 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav18A0A075B656 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav18A0A075B656 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav18A0A075B656 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav18A0A075B656 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav18A0A075B656 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav18A0A075B656 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav18A0A075B656 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav18A0A075B656 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav18A0A075B656 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav18A0A075B656 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav18A0A075B656 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav18A0A075B656 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav18A0A075B656 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav18A0A075B656 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.71□□□□□ -0.21
Trav18A0A075B656 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.71□□□□□ -0.21
Trav18A0A075B656 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav18A0A075B656 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav18A0A075B656 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav18A0A075B656 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav18A0A075B656 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav18A0A075B656 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav18A0A075B656 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav18A0A075B656 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav18A0A075B656 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav18A0A075B656 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav18A0A075B656 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav18A0A075B656 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav18A0A075B656 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav18A0A075B656 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav18A0A075B656 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav18A0A075B656 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav18A0A075B656 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav18A0A075B656 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav18A0A075B656 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav18A0A075B656 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav18A0A075B656 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav18A0A075B656 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav18A0A075B656 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.7□□□□□ -0.22
Trav18A0A075B656 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav18A0A075B656 Gm27000-201ENSMUST00000182943 842 ntBASIC13.7□□□□□ -0.22
Trav18A0A075B656 Gm9731-201ENSMUST00000209480 747 ntBASIC13.7□□□□□ -0.22
Trav18A0A075B656 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav18A0A075B656 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav18A0A075B656 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav18A0A075B656 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav18A0A075B656 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav18A0A075B656 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav18A0A075B656 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav18A0A075B656 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav18A0A075B656 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav18A0A075B656 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms