Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8n-2A0A075B633 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8n-2A0A075B633 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav8n-2A0A075B633 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8n-2A0A075B633 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8n-2A0A075B633 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8n-2A0A075B633 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8n-2A0A075B633 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8n-2A0A075B633 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8n-2A0A075B633 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav8n-2A0A075B633 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8n-2A0A075B633 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8n-2A0A075B633 Gm7862-201ENSMUST00000121461 292 ntBASIC15.29■□□□□ 0.04
Trav8n-2A0A075B633 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav8n-2A0A075B633 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.29■□□□□ 0.04
Trav8n-2A0A075B633 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8n-2A0A075B633 Gm27867-201ENSMUST00000184778 125 ntBASIC15.29■□□□□ 0.04
Trav8n-2A0A075B633 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.29■□□□□ 0.04
Trav8n-2A0A075B633 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.29■□□□□ 0.04
Trav8n-2A0A075B633 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8n-2A0A075B633 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8n-2A0A075B633 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.29■□□□□ 0.04
Trav8n-2A0A075B633 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8n-2A0A075B633 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8n-2A0A075B633 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8n-2A0A075B633 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Gm37935-201ENSMUST00000192012 982 ntBASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Gm6296-201ENSMUST00000222599 943 ntBASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Trav8n-2A0A075B633 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav8n-2A0A075B633 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.27■□□□□ 0.03
Trav8n-2A0A075B633 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav8n-2A0A075B633 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav8n-2A0A075B633 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav8n-2A0A075B633 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.27■□□□□ 0.03
Trav8n-2A0A075B633 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav8n-2A0A075B633 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8n-2A0A075B633 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8n-2A0A075B633 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8n-2A0A075B633 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav8n-2A0A075B633 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8n-2A0A075B633 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8n-2A0A075B633 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8n-2A0A075B633 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Trav8n-2A0A075B633 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.26■□□□□ 0.03
Trav8n-2A0A075B633 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.26■□□□□ 0.03
Trav8n-2A0A075B633 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8n-2A0A075B633 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav8n-2A0A075B633 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms