Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Trav5-1A0A075B5Z7 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5-1A0A075B5Z7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 Gm44450-201ENSMUST00000199528 114 ntBASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav5-1A0A075B5Z7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Gm7284-201ENSMUST00000131667 944 ntBASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Gm27704-201ENSMUST00000185094 107 ntBASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Gm18421-201ENSMUST00000204122 625 ntBASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-1A0A075B5Z7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Rarb-207ENSMUST00000225921 2756 ntBASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-1A0A075B5Z7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav5-1A0A075B5Z7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-1A0A075B5Z7 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-1A0A075B5Z7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-1A0A075B5Z7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-1A0A075B5Z7 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-1A0A075B5Z7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-1A0A075B5Z7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms