Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcb1Q9Z0H3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcb1Q9Z0H3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcb1Q9Z0H3 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcb1Q9Z0H3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.37■□□□□ 0.37
Smarcb1Q9Z0H3 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.37■□□□□ 0.37
Smarcb1Q9Z0H3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Smarcb1Q9Z0H3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcb1Q9Z0H3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcb1Q9Z0H3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcb1Q9Z0H3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcb1Q9Z0H3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcb1Q9Z0H3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcb1Q9Z0H3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcb1Q9Z0H3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcb1Q9Z0H3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcb1Q9Z0H3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcb1Q9Z0H3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Smarcb1Q9Z0H3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.36■□□□□ 0.37
Smarcb1Q9Z0H3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcb1Q9Z0H3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcb1Q9Z0H3 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcb1Q9Z0H3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.36■□□□□ 0.37
Smarcb1Q9Z0H3 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.36■□□□□ 0.37
Smarcb1Q9Z0H3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.36■□□□□ 0.37
Smarcb1Q9Z0H3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcb1Q9Z0H3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Smarcb1Q9Z0H3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcb1Q9Z0H3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.36■□□□□ 0.37
Smarcb1Q9Z0H3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcb1Q9Z0H3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Smarcb1Q9Z0H3 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.36■□□□□ 0.37
Smarcb1Q9Z0H3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcb1Q9Z0H3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcb1Q9Z0H3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcb1Q9Z0H3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcb1Q9Z0H3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcb1Q9Z0H3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.36■□□□□ 0.37
Smarcb1Q9Z0H3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcb1Q9Z0H3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcb1Q9Z0H3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcb1Q9Z0H3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcb1Q9Z0H3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Smarcb1Q9Z0H3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcb1Q9Z0H3 Gm7153-201ENSMUST00000117092 455 ntBASIC17.35■□□□□ 0.37
Smarcb1Q9Z0H3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcb1Q9Z0H3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Smarcb1Q9Z0H3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcb1Q9Z0H3 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcb1Q9Z0H3 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.35■□□□□ 0.37
Smarcb1Q9Z0H3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcb1Q9Z0H3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcb1Q9Z0H3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcb1Q9Z0H3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Smarcb1Q9Z0H3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.35■□□□□ 0.37
Smarcb1Q9Z0H3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcb1Q9Z0H3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.34■□□□□ 0.37
Smarcb1Q9Z0H3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcb1Q9Z0H3 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.34■□□□□ 0.37
Smarcb1Q9Z0H3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcb1Q9Z0H3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.34■□□□□ 0.37
Smarcb1Q9Z0H3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Smarcb1Q9Z0H3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.34■□□□□ 0.37
Smarcb1Q9Z0H3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.34■□□□□ 0.37
Smarcb1Q9Z0H3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.34■□□□□ 0.37
Smarcb1Q9Z0H3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Smarcb1Q9Z0H3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcb1Q9Z0H3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcb1Q9Z0H3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcb1Q9Z0H3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcb1Q9Z0H3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcb1Q9Z0H3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcb1Q9Z0H3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcb1Q9Z0H3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcb1Q9Z0H3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcb1Q9Z0H3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcb1Q9Z0H3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcb1Q9Z0H3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcb1Q9Z0H3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.33■□□□□ 0.37
Smarcb1Q9Z0H3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcb1Q9Z0H3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcb1Q9Z0H3 Gm10052-201ENSMUST00000168019 960 ntBASIC17.33■□□□□ 0.36
Smarcb1Q9Z0H3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcb1Q9Z0H3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.33■□□□□ 0.36
Smarcb1Q9Z0H3 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Smarcb1Q9Z0H3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.33■□□□□ 0.36
Smarcb1Q9Z0H3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.33■□□□□ 0.36
Smarcb1Q9Z0H3 Gm7729-201ENSMUST00000050143 801 ntBASIC17.33■□□□□ 0.36
Smarcb1Q9Z0H3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcb1Q9Z0H3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Smarcb1Q9Z0H3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcb1Q9Z0H3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcb1Q9Z0H3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcb1Q9Z0H3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Smarcb1Q9Z0H3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcb1Q9Z0H3 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.33■□□□□ 0.36
Smarcb1Q9Z0H3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcb1Q9Z0H3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcb1Q9Z0H3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcb1Q9Z0H3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms