Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcn5Q9WVD4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.33■□□□□ 0.37
Clcn5Q9WVD4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.33■□□□□ 0.37
Clcn5Q9WVD4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcn5Q9WVD4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.33■□□□□ 0.37
Clcn5Q9WVD4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcn5Q9WVD4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcn5Q9WVD4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn5Q9WVD4 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.33■□□□□ 0.36
Clcn5Q9WVD4 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Clcn5Q9WVD4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Clcn5Q9WVD4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Clcn5Q9WVD4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn5Q9WVD4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn5Q9WVD4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn5Q9WVD4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Clcn5Q9WVD4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn5Q9WVD4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Clcn5Q9WVD4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn5Q9WVD4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn5Q9WVD4 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.32■□□□□ 0.36
Clcn5Q9WVD4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn5Q9WVD4 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.32■□□□□ 0.36
Clcn5Q9WVD4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn5Q9WVD4 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn5Q9WVD4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn5Q9WVD4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.32■□□□□ 0.36
Clcn5Q9WVD4 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.32■□□□□ 0.36
Clcn5Q9WVD4 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn5Q9WVD4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn5Q9WVD4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn5Q9WVD4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn5Q9WVD4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn5Q9WVD4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn5Q9WVD4 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Clcn5Q9WVD4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Clcn5Q9WVD4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn5Q9WVD4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn5Q9WVD4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn5Q9WVD4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn5Q9WVD4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn5Q9WVD4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.31■□□□□ 0.36
Clcn5Q9WVD4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn5Q9WVD4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.31■□□□□ 0.36
Clcn5Q9WVD4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn5Q9WVD4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Clcn5Q9WVD4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn5Q9WVD4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn5Q9WVD4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Clcn5Q9WVD4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.31■□□□□ 0.36
Clcn5Q9WVD4 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn5Q9WVD4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn5Q9WVD4 Gm18206-201ENSMUST00000207027 926 ntBASIC17.31■□□□□ 0.36
Clcn5Q9WVD4 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn5Q9WVD4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn5Q9WVD4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Clcn5Q9WVD4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn5Q9WVD4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.31■□□□□ 0.36
Clcn5Q9WVD4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn5Q9WVD4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn5Q9WVD4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Clcn5Q9WVD4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Clcn5Q9WVD4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn5Q9WVD4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Clcn5Q9WVD4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn5Q9WVD4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn5Q9WVD4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn5Q9WVD4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn5Q9WVD4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn5Q9WVD4 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Clcn5Q9WVD4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn5Q9WVD4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.3■□□□□ 0.36
Clcn5Q9WVD4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Clcn5Q9WVD4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn5Q9WVD4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Clcn5Q9WVD4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn5Q9WVD4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn5Q9WVD4 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn5Q9WVD4 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.3■□□□□ 0.36
Clcn5Q9WVD4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn5Q9WVD4 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.3■□□□□ 0.36
Clcn5Q9WVD4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn5Q9WVD4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn5Q9WVD4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Clcn5Q9WVD4 Actl10-202ENSMUST00000226583 1501 ntBASIC17.3■□□□□ 0.36
Clcn5Q9WVD4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn5Q9WVD4 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn5Q9WVD4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Clcn5Q9WVD4 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.29■□□□□ 0.36
Clcn5Q9WVD4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn5Q9WVD4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.29■□□□□ 0.36
Clcn5Q9WVD4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Clcn5Q9WVD4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn5Q9WVD4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Clcn5Q9WVD4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn5Q9WVD4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn5Q9WVD4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Clcn5Q9WVD4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn5Q9WVD4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn5Q9WVD4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms