Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chaf1aQ9QWF0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chaf1aQ9QWF0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chaf1aQ9QWF0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chaf1aQ9QWF0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chaf1aQ9QWF0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chaf1aQ9QWF0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Chaf1aQ9QWF0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Chaf1aQ9QWF0 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.78■□□□□ 0.6
Chaf1aQ9QWF0 Gm27011-201ENSMUST00000182352 972 ntBASIC18.78■□□□□ 0.6
Chaf1aQ9QWF0 Gm18666-201ENSMUST00000190039 958 ntBASIC18.78■□□□□ 0.6
Chaf1aQ9QWF0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Chaf1aQ9QWF0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chaf1aQ9QWF0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Chaf1aQ9QWF0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.78■□□□□ 0.6
Chaf1aQ9QWF0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Chaf1aQ9QWF0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chaf1aQ9QWF0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chaf1aQ9QWF0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.78■□□□□ 0.6
Chaf1aQ9QWF0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chaf1aQ9QWF0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chaf1aQ9QWF0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chaf1aQ9QWF0 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.77■□□□□ 0.6
Chaf1aQ9QWF0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chaf1aQ9QWF0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chaf1aQ9QWF0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chaf1aQ9QWF0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.77■□□□□ 0.6
Chaf1aQ9QWF0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chaf1aQ9QWF0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chaf1aQ9QWF0 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chaf1aQ9QWF0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chaf1aQ9QWF0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chaf1aQ9QWF0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chaf1aQ9QWF0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Chaf1aQ9QWF0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chaf1aQ9QWF0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chaf1aQ9QWF0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chaf1aQ9QWF0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Chaf1aQ9QWF0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chaf1aQ9QWF0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chaf1aQ9QWF0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chaf1aQ9QWF0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chaf1aQ9QWF0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Chaf1aQ9QWF0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.76■□□□□ 0.59
Chaf1aQ9QWF0 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.76■□□□□ 0.59
Chaf1aQ9QWF0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chaf1aQ9QWF0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chaf1aQ9QWF0 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chaf1aQ9QWF0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chaf1aQ9QWF0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chaf1aQ9QWF0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chaf1aQ9QWF0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.76■□□□□ 0.59
Chaf1aQ9QWF0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chaf1aQ9QWF0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chaf1aQ9QWF0 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chaf1aQ9QWF0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Chaf1aQ9QWF0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chaf1aQ9QWF0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.75■□□□□ 0.59
Chaf1aQ9QWF0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chaf1aQ9QWF0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chaf1aQ9QWF0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chaf1aQ9QWF0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chaf1aQ9QWF0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chaf1aQ9QWF0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chaf1aQ9QWF0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chaf1aQ9QWF0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chaf1aQ9QWF0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.74■□□□□ 0.59
Chaf1aQ9QWF0 Dancr-204ENSMUST00000132389 2347 ntBASIC18.74■□□□□ 0.59
Chaf1aQ9QWF0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Chaf1aQ9QWF0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chaf1aQ9QWF0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chaf1aQ9QWF0 Gm24841-201ENSMUST00000158676 357 ntBASIC18.74■□□□□ 0.59
Chaf1aQ9QWF0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.74■□□□□ 0.59
Chaf1aQ9QWF0 Gm10698-201ENSMUST00000182663 604 ntBASIC18.74■□□□□ 0.59
Chaf1aQ9QWF0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chaf1aQ9QWF0 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.74■□□□□ 0.59
Chaf1aQ9QWF0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.74■□□□□ 0.59
Chaf1aQ9QWF0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chaf1aQ9QWF0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chaf1aQ9QWF0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chaf1aQ9QWF0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Chaf1aQ9QWF0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chaf1aQ9QWF0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chaf1aQ9QWF0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chaf1aQ9QWF0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chaf1aQ9QWF0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chaf1aQ9QWF0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chaf1aQ9QWF0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.73■□□□□ 0.59
Chaf1aQ9QWF0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chaf1aQ9QWF0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Chaf1aQ9QWF0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.73■□□□□ 0.59
Chaf1aQ9QWF0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chaf1aQ9QWF0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chaf1aQ9QWF0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chaf1aQ9QWF0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chaf1aQ9QWF0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chaf1aQ9QWF0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chaf1aQ9QWF0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chaf1aQ9QWF0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Chaf1aQ9QWF0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms