Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prg4Q9JM99 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prg4Q9JM99 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prg4Q9JM99 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.25■□□□□ 0.03
Prg4Q9JM99 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Prg4Q9JM99 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prg4Q9JM99 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prg4Q9JM99 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prg4Q9JM99 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prg4Q9JM99 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prg4Q9JM99 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prg4Q9JM99 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Prg4Q9JM99 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prg4Q9JM99 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prg4Q9JM99 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.24■□□□□ 0.03
Prg4Q9JM99 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.24■□□□□ 0.03
Prg4Q9JM99 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prg4Q9JM99 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prg4Q9JM99 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prg4Q9JM99 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.24■□□□□ 0.03
Prg4Q9JM99 Gm27357-201ENSMUST00000183754 135 ntBASIC15.24■□□□□ 0.03
Prg4Q9JM99 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.24■□□□□ 0.03
Prg4Q9JM99 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prg4Q9JM99 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prg4Q9JM99 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prg4Q9JM99 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prg4Q9JM99 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Prg4Q9JM99 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prg4Q9JM99 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prg4Q9JM99 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prg4Q9JM99 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prg4Q9JM99 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Prg4Q9JM99 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prg4Q9JM99 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prg4Q9JM99 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prg4Q9JM99 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prg4Q9JM99 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prg4Q9JM99 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Prg4Q9JM99 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.23■□□□□ 0.03
Prg4Q9JM99 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.23■□□□□ 0.03
Prg4Q9JM99 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.23■□□□□ 0.03
Prg4Q9JM99 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prg4Q9JM99 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Prg4Q9JM99 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Prg4Q9JM99 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.23■□□□□ 0.03
Prg4Q9JM99 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Prg4Q9JM99 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.23■□□□□ 0.03
Prg4Q9JM99 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prg4Q9JM99 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prg4Q9JM99 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prg4Q9JM99 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prg4Q9JM99 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Prg4Q9JM99 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prg4Q9JM99 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Prg4Q9JM99 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Prg4Q9JM99 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Prg4Q9JM99 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prg4Q9JM99 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prg4Q9JM99 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.22■□□□□ 0.03
Prg4Q9JM99 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prg4Q9JM99 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prg4Q9JM99 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prg4Q9JM99 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Prg4Q9JM99 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prg4Q9JM99 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Prg4Q9JM99 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Prg4Q9JM99 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prg4Q9JM99 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.22■□□□□ 0.03
Prg4Q9JM99 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prg4Q9JM99 Gm27742-201ENSMUST00000184667 60 ntBASIC15.22■□□□□ 0.03
Prg4Q9JM99 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prg4Q9JM99 Gm7367-201ENSMUST00000057611 492 ntBASIC15.22■□□□□ 0.03
Prg4Q9JM99 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prg4Q9JM99 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Prg4Q9JM99 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Prg4Q9JM99 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Prg4Q9JM99 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Prg4Q9JM99 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prg4Q9JM99 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.22■□□□□ 0.03
Prg4Q9JM99 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prg4Q9JM99 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prg4Q9JM99 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.21■□□□□ 0.03
Prg4Q9JM99 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prg4Q9JM99 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prg4Q9JM99 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Prg4Q9JM99 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Prg4Q9JM99 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prg4Q9JM99 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prg4Q9JM99 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prg4Q9JM99 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Prg4Q9JM99 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Prg4Q9JM99 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Prg4Q9JM99 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prg4Q9JM99 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prg4Q9JM99 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prg4Q9JM99 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Prg4Q9JM99 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Prg4Q9JM99 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Prg4Q9JM99 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prg4Q9JM99 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms