Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps33aQ9D2N9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Vps33aQ9D2N9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps33aQ9D2N9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.83■□□□□ 0.44
Vps33aQ9D2N9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps33aQ9D2N9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps33aQ9D2N9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps33aQ9D2N9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps33aQ9D2N9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps33aQ9D2N9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Vps33aQ9D2N9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.83■□□□□ 0.44
Vps33aQ9D2N9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.83■□□□□ 0.44
Vps33aQ9D2N9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Vps33aQ9D2N9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps33aQ9D2N9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps33aQ9D2N9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps33aQ9D2N9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vps33aQ9D2N9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps33aQ9D2N9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vps33aQ9D2N9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps33aQ9D2N9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps33aQ9D2N9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Vps33aQ9D2N9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Vps33aQ9D2N9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Vps33aQ9D2N9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33aQ9D2N9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33aQ9D2N9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33aQ9D2N9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33aQ9D2N9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33aQ9D2N9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33aQ9D2N9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33aQ9D2N9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33aQ9D2N9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33aQ9D2N9 Gm38285-201ENSMUST00000192928 922 ntBASIC17.8■□□□□ 0.44
Vps33aQ9D2N9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33aQ9D2N9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33aQ9D2N9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33aQ9D2N9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Vps33aQ9D2N9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33aQ9D2N9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33aQ9D2N9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33aQ9D2N9 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33aQ9D2N9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33aQ9D2N9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33aQ9D2N9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33aQ9D2N9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33aQ9D2N9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33aQ9D2N9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33aQ9D2N9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33aQ9D2N9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33aQ9D2N9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33aQ9D2N9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33aQ9D2N9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33aQ9D2N9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.79■□□□□ 0.44
Vps33aQ9D2N9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33aQ9D2N9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Vps33aQ9D2N9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.79■□□□□ 0.44
Vps33aQ9D2N9 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.79■□□□□ 0.44
Vps33aQ9D2N9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33aQ9D2N9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33aQ9D2N9 Gm9988-201ENSMUST00000069786 435 ntBASIC17.79■□□□□ 0.44
Vps33aQ9D2N9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33aQ9D2N9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33aQ9D2N9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33aQ9D2N9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33aQ9D2N9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33aQ9D2N9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33aQ9D2N9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33aQ9D2N9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33aQ9D2N9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33aQ9D2N9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33aQ9D2N9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33aQ9D2N9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33aQ9D2N9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 137.5 ms