Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 AC124603.1-201ENSMUST00000223843 308 ntBASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Nrn1-203ENSMUST00000223611 1443 ntBASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Gm15378-201ENSMUST00000121894 207 ntBASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Gm6576-201ENSMUST00000169678 883 ntBASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Mrpl55Q9CZ83 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Gm11249-201ENSMUST00000117071 859 ntBASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Gm22325-201ENSMUST00000158904 308 ntBASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Mrpl55Q9CZ83 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Mrpl55Q9CZ83 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Mrpl55Q9CZ83 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Mrpl55Q9CZ83 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Mrpl55Q9CZ83 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Mrpl55Q9CZ83 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Mrpl55Q9CZ83 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Mrpl55Q9CZ83 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Mrpl55Q9CZ83 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Mrpl55Q9CZ83 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Mrpl55Q9CZ83 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Mrpl55Q9CZ83 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Mrpl55Q9CZ83 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms