Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snf8Q9CZ28 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snf8Q9CZ28 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snf8Q9CZ28 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Snf8Q9CZ28 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Snf8Q9CZ28 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snf8Q9CZ28 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Snf8Q9CZ28 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snf8Q9CZ28 Gm17661-201ENSMUST00000170317 270 ntBASIC17.29■□□□□ 0.36
Snf8Q9CZ28 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Snf8Q9CZ28 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Snf8Q9CZ28 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.29■□□□□ 0.36
Snf8Q9CZ28 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snf8Q9CZ28 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snf8Q9CZ28 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.29■□□□□ 0.36
Snf8Q9CZ28 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snf8Q9CZ28 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snf8Q9CZ28 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Snf8Q9CZ28 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snf8Q9CZ28 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Snf8Q9CZ28 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snf8Q9CZ28 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snf8Q9CZ28 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snf8Q9CZ28 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Snf8Q9CZ28 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Snf8Q9CZ28 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snf8Q9CZ28 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snf8Q9CZ28 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Snf8Q9CZ28 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.28■□□□□ 0.36
Snf8Q9CZ28 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snf8Q9CZ28 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Snf8Q9CZ28 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Snf8Q9CZ28 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Snf8Q9CZ28 Gm12441-201ENSMUST00000121806 588 ntBASIC17.28■□□□□ 0.36
Snf8Q9CZ28 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snf8Q9CZ28 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.28■□□□□ 0.36
Snf8Q9CZ28 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Snf8Q9CZ28 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snf8Q9CZ28 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.28■□□□□ 0.36
Snf8Q9CZ28 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snf8Q9CZ28 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
Snf8Q9CZ28 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.28■□□□□ 0.36
Snf8Q9CZ28 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snf8Q9CZ28 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snf8Q9CZ28 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snf8Q9CZ28 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snf8Q9CZ28 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snf8Q9CZ28 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.27■□□□□ 0.36
Snf8Q9CZ28 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snf8Q9CZ28 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snf8Q9CZ28 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snf8Q9CZ28 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.27■□□□□ 0.36
Snf8Q9CZ28 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Snf8Q9CZ28 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.27■□□□□ 0.36
Snf8Q9CZ28 Gm27275-201ENSMUST00000184318 272 ntBASIC17.27■□□□□ 0.36
Snf8Q9CZ28 Gm29257-201ENSMUST00000186115 639 ntBASIC17.27■□□□□ 0.36
Snf8Q9CZ28 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.27■□□□□ 0.36
Snf8Q9CZ28 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snf8Q9CZ28 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snf8Q9CZ28 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snf8Q9CZ28 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snf8Q9CZ28 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.27■□□□□ 0.36
Snf8Q9CZ28 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snf8Q9CZ28 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Snf8Q9CZ28 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Snf8Q9CZ28 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snf8Q9CZ28 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snf8Q9CZ28 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snf8Q9CZ28 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.27■□□□□ 0.35
Snf8Q9CZ28 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.27■□□□□ 0.35
Snf8Q9CZ28 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Snf8Q9CZ28 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Gm37025-201ENSMUST00000195159 829 ntBASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snf8Q9CZ28 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms